RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 TRAV5A0A0B4J249 113 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 SMLR1H3BR10 107 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
DDX55-204ENST00000536079 CMC4P56277 68 aaPredicted RBP13.18□□□□□ -0.3
DDX55-204ENST00000536079 B2MP61769 119 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 PSMG4Q5JS54 123 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 LINC00305Q7Z4B0 112 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 C20orf173Q96LM9 149 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 ATP5SQ99766 215 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 FBXL17Q9UF56 701 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 U3KQK5 164 aa13.18□□□□□ -0.3
DDX55-204ENST00000536079 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
DDX55-204ENST00000536079 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
DDX55-204ENST00000536079 RAB31Q13636 194 aa13.17□□□□□ -0.3
DDX55-204ENST00000536079 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
DDX55-204ENST00000536079 RCHY1Q96PM5 261 aa13.17□□□□□ -0.3
DDX55-204ENST00000536079 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
DDX55-204ENST00000536079 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
DDX55-204ENST00000536079 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
DDX55-204ENST00000536079 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
DDX55-204ENST00000536079 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
DDX55-204ENST00000536079 MPDU1O75352 247 aa13.15□□□□□ -0.3
DDX55-204ENST00000536079 GALR1P47211 349 aa13.15□□□□□ -0.3
DDX55-204ENST00000536079 AQP10Q96PS8 301 aa13.15□□□□□ -0.3
DDX55-204ENST00000536079 ELOA3CA0A087WX78 387 aaPredicted RBP13.14□□□□□ -0.31
DDX55-204ENST00000536079 RNF222A6NCQ9 220 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
DDX55-204ENST00000536079 ACTL10Q5JWF8 245 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 Q6ZRG5 221 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 ASB13Q8WXK3 278 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 LINC00052Q96N35 136 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
DDX55-204ENST00000536079 FXYD6-FXYD2A0A087WZ82 144 aa13.13□□□□□ -0.31
DDX55-204ENST00000536079 H3BTX0 84 aa13.13□□□□□ -0.31
DDX55-204ENST00000536079 GIG44P09565 113 aaPredicted RBP13.13□□□□□ -0.31
DDX55-204ENST00000536079 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
DDX55-204ENST00000536079 FGL1Q08830 312 aa13.13□□□□□ -0.31
DDX55-204ENST00000536079 TRPT1Q86TN4 253 aaKnown RBP13.13□□□□□ -0.31
DDX55-204ENST00000536079 GPR82Q96P67 336 aa13.13□□□□□ -0.31
DDX55-204ENST00000536079 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
DDX55-204ENST00000536079 AGRNO00468 2067 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 F6UB75 175 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
DDX55-204ENST00000536079 PSMB3P49720 205 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 SNRPD3P62318 126 aaKnown RBP13.12□□□□□ -0.31
DDX55-204ENST00000536079 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 OVOL2Q9BRP0 275 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
DDX55-204ENST00000536079 A0A087X0K7 114 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 H3BQ15 152 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 ISLRO14498 428 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
DDX55-204ENST00000536079 S100A7P31151 101 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 Q6ZNX1 250 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 STHQ8IWL8 128 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
DDX55-204ENST00000536079 KIR2DL5BA0A0G2JN68 375 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 KIR2DL5BA0A0G2JPC4 375 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 H3BMM0 161 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 SLC17A3O00476 420 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX55-204ENST00000536079 IFNA5P01569 189 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 ID1P41134 155 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 APOC4P55056 127 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 KIR2DL5AQ8N109 375 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 KIR2DL5BQ8NHK3 375 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 SCGB1C1Q8TD33 95 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 PFDN5Q99471 154 aa13.1□□□□□ -0.31
DDX55-204ENST00000536079 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
DDX55-204ENST00000536079 DNAH7Q8WXX0 4024 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 IGLC2P0DOY2 106 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 C4BPBP20851 252 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 MEOX2P50222 304 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 ZNF709Q8N972 641 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 OR11H4Q8NGC9 324 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 FAM167A-AS1Q96KT0 104 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 SLC25A2Q9BXI2 301 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 STAB2Q8WWQ8 2551 aa13.09□□□□□ -0.31
DDX55-204ENST00000536079 PYYP10082 97 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 FAM78BQ5VT40 261 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 S100A7AQ86SG5 101 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.32
DDX55-204ENST00000536079 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
DDX55-204ENST00000536079 C17orf112F2Z3M2 114 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 UBE2CO00762 179 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
DDX55-204ENST00000536079 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
DDX55-204ENST00000536079 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms