RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SNAI2O43623 268 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 NUPR1O60356 82 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 HYPMO75409 117 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 DEDDO75618 318 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 SFT2D2O95562 160 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 HLA-AP01891 365 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 DBIP07108 87 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 LINC00869P0C866 280 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 AKR1C4P17516 323 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 CRYGSP22914 178 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 PYCR1P32322 319 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 PPP1CCP36873 323 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 GPR6P46095 362 aaPredicted RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 CSNK1A1P48729 337 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 TAS2R30P59541 319 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 GNB2P62879 340 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 SUPT4H1P63272 117 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 CXCL6P80162 114 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 Q0VG73 95 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 ENDOGQ14249 297 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 TMEM128Q5BJH2 165 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 VAX1Q5SQQ9 334 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 C1orf100Q5SVJ3 147 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 UNQ5815/PRO19632Q6UWF5 114 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 FOXI2Q6ZQN5 318 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 DEFB125Q8N687 156 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 CHST4Q8NCG5 386 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 OR4P4Q8NGL7 312 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 OR2T27Q8NH04 317 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 LINC01560Q8TB33 94 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 MBD3L1Q8WWY6 194 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 DCUN1D4Q92564 292 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 RBMXL1Q96E39 390 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 BTF3L4Q96K17 158 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 P2RX4Q99571 388 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 RTBDNQ9BSG5 229 aaPredicted RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 OR11A1Q9GZK7 315 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 BET1LQ9NYM9 111 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 C14orf166Q9Y224 244 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 ZNF443Q9Y2A4 671 aaPredicted RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 NOP16Q9Y3C1 178 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 RBM7Q9Y580 266 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 OR51B2Q9Y5P1 312 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 PXMP4Q9Y6I8 212 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 MTORP42345 2549 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 SONP18583 2426 aaKnown RBP2.42□□□□□ -2.02
USP48-215ENST00000534705 CSPG4Q6UVK1 2322 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 CMYA5Q8N3K9 4069 aa2.42□□□□□ -2.02
USP48-215ENST00000534705 NF1P21359 2839 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 TRAV9-1A0A075B6T8 112 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 A0A0B4J2E0 115 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 A0A1B0GWA3 101 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 A0A1B0GX12 115 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 MAP1LC3B2A6NCE7 125 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 H0Y9J4 135 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CDC42EP2O14613 210 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 SLC2A10O95528 541 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 HLA-DRB1P01911 266 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 BGLAPP02818 100 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CTSDP07339 412 aaPredicted RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 MMP7P09237 267 aaPredicted RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CD99P14209 185 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 IGFBP3P17936 291 aaPredicted RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 IGHV1-2P23083 117 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 RPL12P30050 165 aaKnown RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 TSPOP30536 169 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 SRP14P37108 136 aaKnown RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 CCL20P78556 96 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 RUNX1Q01196 453 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 UNC119Q13432 240 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 TAL2Q16559 108 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CEACAM21Q3KPI0 293 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 Q499Y3 187 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 SAMD13Q5VXD3 122 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 DNM1P34Q6PK57 102 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 WDR82Q6UXN9 313 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 Q6ZN92 141 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CYP2G1PQ6ZSU1 146 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 ZNF550Q7Z398 422 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 NIT1Q86X76 327 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CALHM1Q8IU99 346 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 BOD1L2Q8IYS8 172 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 SAXO1Q8IYX7 474 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CYB561D1Q8N8Q1 229 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 CNEP1R1Q8N9A8 125 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 FER1L6-AS1Q8NA97 138 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 SLAMF6Q96DU3 332 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 OR10C1Q96KK4 312 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 OR5B12Q96R08 314 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 RARRES2Q99969 163 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 PRSS27Q9BQR3 290 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 NICN1Q9BSH3 213 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 VAMP8Q9BV40 100 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 MAP1LC3BQ9GZQ8 125 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 GPR84Q9NQS5 396 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 MCTS1Q9ULC4 181 aaKnown RBP2.41□□□□□ -2.02
USP48-215ENST00000534705 WSB1Q9Y6I7 421 aa2.41□□□□□ -2.02
USP48-215ENST00000534705 PSMB11A5LHX3 300 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms