RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
CAPN1-227ENST00000533909 TMEM41BQ5BJD5 291 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 MORN3Q6PF18 240 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-227ENST00000533909 LRRC20Q8TCA0 184 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 GATAD1Q8WUU5 269 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 UHRF2Q96PU4 802 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 MGST2Q99735 147 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 MED28Q9H204 178 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 ARV1Q9H2C2 271 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 ALG5Q9Y673 324 aa9.85□□□□□ -0.83
CAPN1-227ENST00000533909 ELOA3CA0A087WX78 387 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-227ENST00000533909 PLP1P60201 277 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 EWSR1Q01844 656 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN1-227ENST00000533909 C10orf113Q5VZT2 155 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 EBLN2Q6P2I7 272 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
CAPN1-227ENST00000533909 OR5C1Q8NGR4 320 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 OR5AC2Q9NZP5 309 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 WDR83OSQ9Y284 106 aa9.84□□□□□ -0.83
CAPN1-227ENST00000533909 MPDU1O75352 247 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 NHLH2Q02577 135 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 CLINT1Q14677 625 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 RGS21Q2M5E4 152 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 LINC00305Q7Z4B0 112 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 ZNF709Q8N972 641 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 PFDN5Q99471 154 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 RARRES2Q99969 163 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 RPRMQ9NS64 109 aa9.83□□□□□ -0.84
CAPN1-227ENST00000533909 HUWE1Q7Z6Z7 4374 aaKnown RBP9.83□□□□□ -0.84
CAPN1-227ENST00000533909 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 MPC2O95563 127 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 IGKV3-20P01619 116 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 MIC13Q5XKP0 118 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 FOXI2Q6ZQN5 318 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 THAP6Q8TBB0 222 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 C1QTNF4Q9BXJ3 329 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 DNAJC4Q9NNZ3 241 aa9.82□□□□□ -0.84
CAPN1-227ENST00000533909 H0YIZ8 118 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 SOCS3O14543 225 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 HLA-DRB4P13762 266 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 RPL29P47914 159 aaKnown RBP9.81□□□□□ -0.84
CAPN1-227ENST00000533909 B2MP61769 119 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 PATE2Q6UY27 113 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 BPIFA4PQ86YQ2 179 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 OR4B1Q8NGF8 309 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 SAV1Q9H4B6 383 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-227ENST00000533909 KCNIP2Q9NS61 270 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 SLC39A9Q9NUM3 307 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 HLA-DRB4X5D2U9 266 aa9.81□□□□□ -0.84
CAPN1-227ENST00000533909 AGRNO00468 2067 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 H3BMM0 161 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 RPL12P30050 165 aaKnown RBP9.8□□□□□ -0.84
CAPN1-227ENST00000533909 OPCMLQ14982 345 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 NPCDR1Q9BY65 106 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 MBD2Q9UBB5 411 aa9.8□□□□□ -0.84
CAPN1-227ENST00000533909 C17orf112F2Z3M2 114 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 IFNA5P01569 189 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 CXCL3P19876 107 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 C4BPBP20851 252 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 DEFB1P60022 68 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 PRR20EP86478 221 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 PRR20CP86479 221 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 PRR20DP86480 221 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 PRR20BP86481 221 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 PRR20AP86496 221 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 ATP5SQ99766 215 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 CLEC5AQ9NY25 188 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 HSPB11Q9Y547 144 aa9.79□□□□□ -0.84
CAPN1-227ENST00000533909 A0A087X0K7 114 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 FCN2Q15485 313 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 GDF5OSQ5U4N7 250 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 FAM78BQ5VT40 261 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 IGFL4Q6B9Z1 124 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 CHAC2Q8WUX2 184 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 RNF126Q9BV68 326 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 SMIM3Q9BZL3 60 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 XCL2Q9UBD3 114 aa9.78□□□□□ -0.84
CAPN1-227ENST00000533909 TENM2Q9NT68 2774 aa9.77□□□□□ -0.84
CAPN1-227ENST00000533909 A0A0J9YX75 114 aa9.77□□□□□ -0.85
CAPN1-227ENST00000533909 F6UB75 175 aa9.77□□□□□ -0.85
CAPN1-227ENST00000533909 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
CAPN1-227ENST00000533909 CXCL2P19875 107 aa9.77□□□□□ -0.85
CAPN1-227ENST00000533909 PSG9Q00887 426 aa9.77□□□□□ -0.85
CAPN1-227ENST00000533909 PMS2P11Q13670 270 aa9.77□□□□□ -0.85
CAPN1-227ENST00000533909 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms