RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LSM5Q9Y4Y9 91 aaKnown RBP7.55□□□□□ -1.2
CAPN1-225ENST00000533704 C5orf51A6NDU8 294 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 HYPMO75409 117 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 DEDDO75618 318 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
CAPN1-225ENST00000533704 LINC00869P0C866 280 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 DLK1P80370 383 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 OXA1LQ15070 435 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 SAMD13Q5VXD3 122 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 TMEM14EPQ6UXP3 125 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 Q6ZTC4 211 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 SLC35B3Q9H1N7 401 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 HRH4Q9H3N8 390 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 NUDT15Q9NV35 164 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 CELA1Q9UNI1 258 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 HYDINQ4G0P3 5121 aa7.54□□□□□ -1.2
CAPN1-225ENST00000533704 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 C11orf94C9JXX5 98 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 H3BRN7 92 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 TSC22D2O75157 780 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 H2AFB2P0C5Z0 115 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 PSG9Q00887 426 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 AKAP14Q86UN6 197 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 C12orf45Q8N5I9 185 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-225ENST00000533704 RPP25LQ8N5L8 163 aaKnown RBP7.53□□□□□ -1.2
CAPN1-225ENST00000533704 RNF182Q8N6D2 247 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 ZNF431Q8TF32 576 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-225ENST00000533704 GPR82Q96P67 336 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 UHRF2Q96PU4 802 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 SHANK2-AS3Q9BTD1 123 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 CCDC32Q9BV29 185 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-225ENST00000533704 ARL6Q9H0F7 186 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
CAPN1-225ENST00000533704 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 FAM240BA0A1B0GVZ2 78 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 GOSR2O14653 212 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
CAPN1-225ENST00000533704 CAV2P51636 162 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 TAS2R30P59541 319 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 S100A10P60903 97 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 SELENOTP62341 195 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 SPATA31B1PQ5VZV4 182 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 LGALS9CQ6DKI2 356 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 TEPPQ6URK8 271 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF709Q8N972 641 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF738Q8NE65 137 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 LRRC20Q8TCA0 184 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 GOLT1BQ9Y3E0 138 aa7.52□□□□□ -1.21
CAPN1-225ENST00000533704 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 K7EPK0 472 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 CST7O76096 145 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 PRB4P10163 310 aaPredicted RBP7.51□□□□□ -1.21
CAPN1-225ENST00000533704 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
CAPN1-225ENST00000533704 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 MZT2BQ6NZ67 158 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF705AQ6ZN79 300 aaPredicted RBP7.51□□□□□ -1.21
CAPN1-225ENST00000533704 S100A7AQ86SG5 101 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF546Q86UE3 836 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 C17orf77Q96MU5 243 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 TMEM208Q9BTX3 173 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 ARV1Q9H2C2 271 aa7.51□□□□□ -1.21
CAPN1-225ENST00000533704 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 TRAV8-2A0A0B4J237 113 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 FAM24AA6NFZ4 105 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 FNDC10F2Z333 226 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 RGS13O14921 159 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 AGPAT2O15120 278 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 COX7A2P2O60397 106 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 HBE1P02100 147 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 SNRPCP09234 159 aaKnown RBP7.5□□□□□ -1.21
CAPN1-225ENST00000533704 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
CAPN1-225ENST00000533704 PLP1P60201 277 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 C2orf50Q96LR7 162 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 CLUHP3Q96NS8 147 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 APLNQ9ULZ1 77 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
CAPN1-225ENST00000533704 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 TMEM189A5PLL7 270 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 ZNF705FA8MVS1 300 aaPredicted RBP7.49□□□□□ -1.21
CAPN1-225ENST00000533704 M0R2Z0 102 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
CAPN1-225ENST00000533704 SPART-AS1P0CW21 52 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 HTN3P15516 51 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PVALBP20472 110 aaPredicted RBP7.49□□□□□ -1.21
CAPN1-225ENST00000533704 TCTAP57738 103 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 RHOBP62745 196 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PRR20EP86478 221 aa7.49□□□□□ -1.21
CAPN1-225ENST00000533704 PRR20CP86479 221 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms