RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 C20orf204Q6ZNR8 217 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 DLX4Q92988 240 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 ERG28Q9UKR5 140 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 POLR3KQ9Y2Y1 108 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 NPIPB5A8MRT5 1133 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 TOMM40O96008 361 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 IGHG3P01860 377 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 PDE6HQ13956 83 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 C5orf64Q2M2E5 130 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 C15orf32Q32M92 178 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 PPDPFLQ8WWR9 84 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 USMG5Q96IX5 58 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 LTBP1Q14766 1721 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV2A0A0B4J234 112 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 C15orf62A8K5M9 175 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-236ENST00000533667 B3GALT5-AS1P59052 145 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM258P61165 79 aa5.74□□□□□ -1.49
CTNND1-236ENST00000533667 SIP14410 1827 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 TRBV20-1A0A075B6N2 111 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 FAM231BA6NCW3 169 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 C9orf118A6NHY6 69 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 D6R8Y8 96 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 ETV2O00321 342 aaPredicted RBP5.73□□□□□ -1.49
CTNND1-236ENST00000533667 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 GAFA1Q96PS6 74 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 RFNGQ9Y644 331 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 FAM223BA6NKX1 122 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 VCYO14598 125 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 TFF1P04155 84 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 NTF4P34130 210 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 CT83Q5H943 113 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 KLF17Q5JT82 389 aaPredicted RBP5.73□□□□□ -1.49
CTNND1-236ENST00000533667 LYZL1Q6UWQ5 148 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 VMO1Q7Z5L0 202 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 FAM223AQ8IWN6 122 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 NUP35Q8NFH5 326 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 SCRT1Q9BWW7 348 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV8-1A0A0A6YYK1 113 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 TRGV4A0A0C4DH28 118 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 M0R2P5 195 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 SMAD7O15105 426 aaKnown RBP5.73□□□□□ -1.49
CTNND1-236ENST00000533667 CCL25O15444 150 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 EVI2AP22794 236 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 GLMPQ8WWB7 406 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 LINC00473A8K010 186 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 ADARB2-AS1A8MUL3 147 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 HGFACQ04756 655 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 C10orf55Q5SWW7 151 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 OVOL2Q9BRP0 275 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 SIGLEC9Q9Y336 463 aa5.73□□□□□ -1.49
CTNND1-236ENST00000533667 FREM3P0C091 2139 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 IGKV2-40A0A087WW87 121 aaPredicted RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 GGTLC3B5MD39 225 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 BUB1B-PAK6H3BSN5 160 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 IGKV2D-40P01614 121 aaPredicted RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 RNASE2P10153 161 aaKnown RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 Q0VG73 95 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 C3orf36Q3SXR2 165 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 FAM90A2PQ658T7 463 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 SPACA3Q8IXA5 215 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 ZNF492Q9P255 531 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 SH2D1AO60880 128 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 ZCCHC24Q8N2G6 241 aaKnown RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 EXOC3-AS1Q8N2X6 119 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 PRADC1Q9BSG0 188 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV40A0A0B4J280 105 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 IGHV4-39P01824 125 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 CRPP02741 224 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 C3orf79P0CE67 100 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 Q0VFX4 171 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 TMEM155Q4W5P6 130 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 METRNQ9UJH8 293 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 EP400Q96L91 3159 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 TRAV3A0A0B4J244 114 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 LYNX1G3V0Z9 82 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 LYNX1P0DP58 116 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 CD24P25063 80 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
CTNND1-236ENST00000533667 BMPERQ8N8U9 685 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 MRAPQ8TCY5 172 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 RASL10AQ92737 203 aa5.72□□□□□ -1.49
CTNND1-236ENST00000533667 ANK1P16157 1881 aa5.71□□□□□ -1.49
CTNND1-236ENST00000533667 IGKV1D-17A0A075B6S4 117 aa5.71□□□□□ -1.49
CTNND1-236ENST00000533667 RPL36AP83881 106 aaKnown RBP5.71□□□□□ -1.49
CTNND1-236ENST00000533667 FHL1Q13642 323 aa5.71□□□□□ -1.49
CTNND1-236ENST00000533667 KIR3DS1Q14943 382 aa5.71□□□□□ -1.49
CTNND1-236ENST00000533667 BCL6BQ8N143 479 aaPredicted RBP5.71□□□□□ -1.49
CTNND1-236ENST00000533667 RPL36ALQ969Q0 106 aaKnown RBP5.71□□□□□ -1.49
CTNND1-236ENST00000533667 C1QTNF4Q9BXJ3 329 aa5.71□□□□□ -1.49
CTNND1-236ENST00000533667 ZSWIM8A7E2V4 1837 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 ESPL1Q14674 2120 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 LMO1P25800 156 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 GUSBP1Q15486 140 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms