RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 OR11H1Q8NG94 326 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 TMEM167BQ9NRX6 74 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 TMEM14CQ9P0S9 112 aa12.19□□□□□ -0.46
TRIM3-213ENST00000533309 IGHV3-49A0A0A0MS15 119 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 A0A1W2PRX2 142 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 ZNF320A2RRD8 509 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 C9JQL5 133 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 LINC01619G3V211 115 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 ATP6V1G1O75348 118 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 NPPCP23582 126 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 REC114Q7Z4M0 266 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 DUX3Q96PT4 197 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 EIF5A2Q9GZV4 153 aaKnown RBP12.18□□□□□ -0.46
TRIM3-213ENST00000533309 MANBALQ9NQG1 85 aa12.18□□□□□ -0.46
TRIM3-213ENST00000533309 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 A8MWP6 167 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 PAGE4O60829 102 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 IFNA1P01562 189 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
TRIM3-213ENST00000533309 IGLC2P0DOY2 106 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 ZP3P21754 424 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 SLURP1P55000 103 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 UBE2G2P60604 165 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 FOXL1Q12952 345 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 FHL3Q13643 280 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 OR1N2Q8NGR9 330 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
TRIM3-213ENST00000533309 DAZ1Q9NQZ3 744 aaKnown RBP12.17□□□□□ -0.46
TRIM3-213ENST00000533309 YTHDF2Q9Y5A9 579 aaKnown RBP12.17□□□□□ -0.46
TRIM3-213ENST00000533309 H3BQ15 152 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 K7EMT4 169 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 LGALS9O00182 355 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 EDN2P20800 178 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 PPT1P50897 306 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
TRIM3-213ENST00000533309 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
TRIM3-213ENST00000533309 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
TRIM3-213ENST00000533309 TMEM213A2RRL7 107 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 FAM74A7A6NL05 159 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 S100A7P31151 101 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 OR8I2Q8N0Y5 310 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 RXFP4Q8TDU9 374 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 ZNF586Q9NXT0 402 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
TRIM3-213ENST00000533309 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 H3BTX0 84 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 NBEAP1P0C6P0 100 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.47
TRIM3-213ENST00000533309 RPL7P18124 248 aaKnown RBP12.15□□□□□ -0.47
TRIM3-213ENST00000533309 ATP5G3P48201 142 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 CD81P60033 236 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.47
TRIM3-213ENST00000533309 AWAT1Q58HT5 328 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 C1orf194Q5T5A4 169 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 GLMPQ8WWB7 406 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 DPF1Q92782 380 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 TREM1Q9NP99 234 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 RNF24Q9Y225 148 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.47
TRIM3-213ENST00000533309 PEA15Q15121 130 aa12.14□□□□□ -0.47
TRIM3-213ENST00000533309 BLNKQ8WV28 456 aa12.14□□□□□ -0.47
TRIM3-213ENST00000533309 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 GGTLC3B5MD39 225 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 C11orf94C9JXX5 98 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 CCL24O00175 119 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
TRIM3-213ENST00000533309 CST9LP1Q5W188 147 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 DLX4Q92988 240 aaPredicted RBP12.13□□□□□ -0.47
TRIM3-213ENST00000533309 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 SMPXQ9UHP9 88 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 VWFP04275 2813 aa12.13□□□□□ -0.47
TRIM3-213ENST00000533309 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 NDUFB4O95168 129 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 SRP19P09132 144 aaKnown RBP12.12□□□□□ -0.47
TRIM3-213ENST00000533309 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 NARS2Q96I59 477 aaKnown RBP12.12□□□□□ -0.47
TRIM3-213ENST00000533309 GPR82Q96P67 336 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 STAB1Q9NY15 2570 aa12.12□□□□□ -0.47
TRIM3-213ENST00000533309 A0A1W2PS18 150 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 SLC17A3O00476 420 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 CHEK1O14757 476 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 MYCNOSP40205 109 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
TRIM3-213ENST00000533309 CCDC28AQ8IWP9 274 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms