RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TFPI2P48307 235 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 CAMLGP49069 296 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 PXDC1Q5TGL8 231 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 OR2G3Q8NGZ4 309 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 IGKV3-7A0A075B6H7 116 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 UMAD1C9J7I0 102 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 SPP1P10451 314 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 S100A7P31151 101 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 RAB5CP51148 216 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 Q6ZWC4 215 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
PKP3-209ENST00000533069 IGHV3-66A0A0C4DH42 116 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
PKP3-209ENST00000533069 AGPAT2O15120 278 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 TOMM40O96008 361 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 ATP6V0CP27449 155 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
PKP3-209ENST00000533069 CYP2G1PQ6ZSU1 146 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 BPIFCQ8NFQ6 507 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
PKP3-209ENST00000533069 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 TEX261Q6UWH6 196 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 Q6ZRG5 221 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 MGST2Q99735 147 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 U3KQE9 123 aa12.32□□□□□ -0.44
PKP3-209ENST00000533069 IGKV1OR2-108A0A075B7D4 117 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 HELTA6NFD8 242 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 IL4P05112 153 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 ZNF767PQ75MW2 155 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
PKP3-209ENST00000533069 IGKV1D-37A0A075B6S9 117 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 ELOA3CA0A087WX78 387 aaPredicted RBP12.3□□□□□ -0.44
PKP3-209ENST00000533069 SPRY2O43597 315 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 RPL35AP18077 110 aaKnown RBP12.3□□□□□ -0.44
PKP3-209ENST00000533069 PLP1P60201 277 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 B2MP61769 119 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PRR20EP86478 221 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PRR20CP86479 221 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PRR20DP86480 221 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PRR20BP86481 221 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PRR20AP86496 221 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
PKP3-209ENST00000533069 AKR1C8PQ5T2L2 129 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 WFDC3Q8IUB2 231 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 OR51G1Q8NGK1 321 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PFDN5Q99471 154 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
PKP3-209ENST00000533069 PSG1P11464 419 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 USF2Q15853 346 aaPredicted RBP12.29□□□□□ -0.44
PKP3-209ENST00000533069 DEFB135Q30KP9 77 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 C16orf54Q6UWD8 224 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 RNF141Q8WVD5 230 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 SLC39A9Q9NUM3 307 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 RYR3Q15413 4870 aa12.29□□□□□ -0.44
PKP3-209ENST00000533069 K7EQG2 157 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 M6PRP20645 277 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 DEFB131AP59861 70 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 ZNF124Q15973 351 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 ZNF680Q8NEM1 530 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 TMED6Q8WW62 240 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 RNF183Q96D59 192 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 RNF125Q96EQ8 232 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 CSTL1Q9H114 145 aa12.28□□□□□ -0.44
PKP3-209ENST00000533069 LINC00869P0C866 280 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 SULT1A2P50226 295 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 TMEM41BQ5BJD5 291 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 FFAR4Q5NUL3 377 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 GLMPQ8WWB7 406 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
PKP3-209ENST00000533069 RGS13O14921 159 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 BUB3O43684 328 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 ZNF90Q03938 601 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 ALKAL2Q6UX46 152 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 FAM24BQ8N5W8 94 aa12.26□□□□□ -0.45
PKP3-209ENST00000533069 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms