RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 HBG2P69892 147 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 ARL16Q0P5N6 197 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 TMEM252Q8N6L7 170 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 TMEM217Q8N7C4 229 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 CELA1Q9UNI1 258 aa12.87□□□□□ -0.35
SMG1-203ENST00000532700 AP2S1P53680 142 aaPredicted RBP12.86□□□□□ -0.35
SMG1-203ENST00000532700 FXYD7P58549 80 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 SELENOTP62341 195 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 OXA1LQ15070 435 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 MORN3Q6PF18 240 aaPredicted RBP12.86□□□□□ -0.35
SMG1-203ENST00000532700 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
SMG1-203ENST00000532700 IGSF23A1L1A6 192 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 F6UB75 175 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 ATP6V1FQ16864 119 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 SCRT1Q9BWW7 348 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 SLC25A32Q9H2D1 315 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
SMG1-203ENST00000532700 MPC2O95563 127 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 PRR20EP86478 221 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 PRR20CP86479 221 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 PRR20DP86480 221 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 PRR20BP86481 221 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 PRR20AP86496 221 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 RAB31Q13636 194 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 SLC45A2Q9UMX9 530 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
SMG1-203ENST00000532700 FRAS1Q86XX4 4008 aa12.84□□□□□ -0.35
SMG1-203ENST00000532700 H0YIZ8 118 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 PRB4P10163 310 aaPredicted RBP12.83□□□□□ -0.36
SMG1-203ENST00000532700 ORM2P19652 201 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 CXCL3P19876 107 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.36
SMG1-203ENST00000532700 BAXQ07812 192 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 FCN2Q15485 313 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 C1orf194Q5T5A4 169 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 S100A7AQ86SG5 101 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 ZNF546Q86UE3 836 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 TMEM147Q9BVK8 224 aa12.83□□□□□ -0.36
SMG1-203ENST00000532700 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 Q6ZTC4 211 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 OR1B1Q8NGR6 318 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 ASB13Q8WXK3 278 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
SMG1-203ENST00000532700 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 SEPSECSQ9HD40 501 aaKnown RBP12.82□□□□□ -0.36
SMG1-203ENST00000532700 DOK5Q9P104 306 aa12.82□□□□□ -0.36
SMG1-203ENST00000532700 HYPMO75409 117 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 LINC00869P0C866 280 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 MIFP14174 115 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 PSMB3P49720 205 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 PXDC1Q5TGL8 231 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
SMG1-203ENST00000532700 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 AGPAT2O15120 278 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 CAMLGP49069 296 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 PLP1P60201 277 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 RAP2BP61225 183 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 NHLH2Q02577 135 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 TMEM41BQ5BJD5 291 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 OR8I2Q8N0Y5 310 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 MFFQ9GZY8 342 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 APLNQ9ULZ1 77 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 VPS13DQ5THJ4 4388 aa12.8□□□□□ -0.36
SMG1-203ENST00000532700 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 FGL1Q08830 312 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
SMG1-203ENST00000532700 FOXI2Q6ZQN5 318 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 MGST2Q99735 147 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 RSG1Q9BU20 258 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 HRH4Q9H3N8 390 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 MBD2Q9UBB5 411 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 HIGD1AQ9Y241 93 aa12.79□□□□□ -0.36
SMG1-203ENST00000532700 A0A0J9YX75 114 aa12.78□□□□□ -0.36
SMG1-203ENST00000532700 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
SMG1-203ENST00000532700 H3BRN7 92 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms