RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
SSH3-209ENST00000532600 DEFB4AO15263 64 aa13.79□□□□□ -0.2
SSH3-209ENST00000532600 C4BPBP20851 252 aa13.79□□□□□ -0.2
SSH3-209ENST00000532600 LYZP61626 148 aa13.79□□□□□ -0.2
SSH3-209ENST00000532600 PBDC1Q9BVG4 233 aa13.79□□□□□ -0.2
SSH3-209ENST00000532600 C11orf68Q9H3H3 251 aaKnown RBP13.79□□□□□ -0.2
SSH3-209ENST00000532600 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 AGPAT2O15120 278 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 BUB3O43684 328 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 FABP1P07148 127 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 NANOS2P60321 138 aaKnown RBP13.78□□□□□ -0.2
SSH3-209ENST00000532600 FGL1Q08830 312 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 ATP6V1FQ16864 119 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 STHQ8IWL8 128 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 SMIM3Q9BZL3 60 aa13.78□□□□□ -0.2
SSH3-209ENST00000532600 RNF222A6NCQ9 220 aa13.77□□□□□ -0.21
SSH3-209ENST00000532600 LINC00869P0C866 280 aa13.77□□□□□ -0.21
SSH3-209ENST00000532600 BPIFCQ8NFQ6 507 aa13.77□□□□□ -0.21
SSH3-209ENST00000532600 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
SSH3-209ENST00000532600 NARS2Q96I59 477 aaKnown RBP13.77□□□□□ -0.21
SSH3-209ENST00000532600 AQP10Q96PS8 301 aa13.77□□□□□ -0.21
SSH3-209ENST00000532600 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 HELTA6NFD8 242 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 LY6G6CO95867 125 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 FGF7P21781 194 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 EIF2B2P49770 351 aaKnown RBP13.76□□□□□ -0.21
SSH3-209ENST00000532600 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 Q8NAQ8 132 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 ST6GAL2Q96JF0 529 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 ATP5SQ99766 215 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 DOK5Q9P104 306 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 TNFSF18Q9UNG2 199 aa13.76□□□□□ -0.21
SSH3-209ENST00000532600 KMT2AQ03164 3969 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 ORM2P19652 201 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 CAMLGP49069 296 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PLP1P60201 277 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 SELENOTP62341 195 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PRR20EP86478 221 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PRR20CP86479 221 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PRR20DP86480 221 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PRR20BP86481 221 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PRR20AP86496 221 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 OPCMLQ14982 345 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PSMG4Q5JS54 123 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 MIC13Q5XKP0 118 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 OR11H4Q8NGC9 324 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
SSH3-209ENST00000532600 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
SSH3-209ENST00000532600 RBMY1A1P0DJD3 496 aaKnown RBP13.74□□□□□ -0.21
SSH3-209ENST00000532600 RBMY1CP0DJD4 496 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 RBMY1FQ15415 496 aaKnown RBP13.74□□□□□ -0.21
SSH3-209ENST00000532600 SIGLEC15Q6ZMC9 328 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 OR1B1Q8NGR6 318 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 C11orf45Q8TAV5 145 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 NPCDR1Q9BY65 106 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 WDR61Q9GZS3 305 aaKnown RBP13.74□□□□□ -0.21
SSH3-209ENST00000532600 NRN1Q9NPD7 142 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 X6R8D5 127 aa13.74□□□□□ -0.21
SSH3-209ENST00000532600 SPP1P10451 314 aa13.73□□□□□ -0.21
SSH3-209ENST00000532600 AP2S1P53680 142 aaPredicted RBP13.73□□□□□ -0.21
SSH3-209ENST00000532600 CLEC5AQ9NY25 188 aa13.73□□□□□ -0.21
SSH3-209ENST00000532600 KLK5Q9Y337 293 aaPredicted RBP13.73□□□□□ -0.21
SSH3-209ENST00000532600 VPS13DQ5THJ4 4388 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 IGHV4-28A0A0C4DH34 117 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
SSH3-209ENST00000532600 DEFB1P60022 68 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
SSH3-209ENST00000532600 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 SCRT1Q9BWW7 348 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 ARL6Q9H0F7 186 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
SSH3-209ENST00000532600 H3BRN7 92 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 HYPMO75409 117 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
SSH3-209ENST00000532600 RAB31Q13636 194 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 TMEM37Q8WXS4 190 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
SSH3-209ENST00000532600 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
SSH3-209ENST00000532600 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
SSH3-209ENST00000532600 ZNF98A6NK75 572 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 H3BMM0 161 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 SOCS3O14543 225 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 ARPC5O15511 151 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 MPDU1O75352 247 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 CD300CQ08708 224 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 TMEM41BQ5BJD5 291 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 GCSAMLQ5JQS6 135 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 MORN5Q5VZ52 161 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 C17orf77Q96MU5 243 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 SHANK2-AS3Q9BTD1 123 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 RSG1Q9BU20 258 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 SLC25A39Q9BZJ4 359 aaPredicted RBP13.7□□□□□ -0.22
SSH3-209ENST00000532600 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
SSH3-209ENST00000532600 OR5G3P0C626 314 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 B2MP61769 119 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms