RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ALKAL2Q6UX46 152 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
CPSF1-206ENST00000531480 TMED6Q8WW62 240 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.68
CPSF1-206ENST00000531480 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 WFDC1Q9HC57 220 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 PFDN2Q9UHV9 154 aa10.83□□□□□ -0.68
CPSF1-206ENST00000531480 HBE1P02100 147 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 RPL29P47914 159 aaKnown RBP10.82□□□□□ -0.68
CPSF1-206ENST00000531480 SULT1A2P50226 295 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 TCF24Q7RTU0 167 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 NPCDR1Q9BY65 106 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
CPSF1-206ENST00000531480 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
CPSF1-206ENST00000531480 ZNF705EA8MWA4 302 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-206ENST00000531480 PATE2Q6UY27 113 aa10.81□□□□□ -0.68
CPSF1-206ENST00000531480 OR1L4Q8NGR5 311 aa10.81□□□□□ -0.68
CPSF1-206ENST00000531480 A0A1W2PPV4 95 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 HELTA6NFD8 242 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 ZNF98A6NK75 572 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 H3BRN7 92 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 HYPMO75409 117 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 CD7P09564 240 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 IFITM2Q01629 132 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 GUCA2BQ16661 112 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 DCANP1Q8TF63 244 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 PFDN5Q99471 154 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 SLC25A39Q9BZJ4 359 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-206ENST00000531480 ACTR3CQ9C0K3 210 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-206ENST00000531480 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
CPSF1-206ENST00000531480 ELOA3CA0A087WX78 387 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-206ENST00000531480 OR4C46A6NHA9 309 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 ORM2P19652 201 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 M6PRP20645 277 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 CD81P60033 236 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 OR1B1Q8NGR6 318 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 TMEM37Q8WXS4 190 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 SHANK2-AS3Q9BTD1 123 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 SLC39A9Q9NUM3 307 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 SMAD5-AS1Q9Y6J3 95 aa10.79□□□□□ -0.68
CPSF1-206ENST00000531480 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 K7EQG2 157 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 TAGLN2P37802 199 aaKnown RBP10.78□□□□□ -0.68
CPSF1-206ENST00000531480 PPT1P50897 306 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 TAS2R45P59539 299 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 B2MP61769 119 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 RHOBP62745 196 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 ODF3L2Q3SX64 289 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 FFAR4Q5NUL3 377 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 SIGLEC15Q6ZMC9 328 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
CPSF1-206ENST00000531480 SEPSECSQ9HD40 501 aaKnown RBP10.78□□□□□ -0.68
CPSF1-206ENST00000531480 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 IGHV4-30-4P0DP06 118 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 LINC00322Q6ZN03 302 aaPredicted RBP10.77□□□□□ -0.69
CPSF1-206ENST00000531480 STXBP6Q8NFX7 210 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 OR10G4Q8NGN3 311 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 OR10G9Q8NGN4 311 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 OR10G7Q8NGN6 311 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 GATAD1Q8WUU5 269 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 GPR82Q96P67 336 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 DNAJC4Q9NNZ3 241 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 DOK5Q9P104 306 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
CPSF1-206ENST00000531480 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
CPSF1-206ENST00000531480 CMC4P56277 68 aaPredicted RBP10.76□□□□□ -0.69
CPSF1-206ENST00000531480 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
CPSF1-206ENST00000531480 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
CPSF1-206ENST00000531480 RSG1Q9BU20 258 aa10.76□□□□□ -0.69
CPSF1-206ENST00000531480 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
CPSF1-206ENST00000531480 OR11H12B2RN74 326 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 SOCS3O14543 225 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 IFNA1P01562 189 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 OR5G3P0C626 314 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 C10orf113Q5VZT2 155 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 LINC00305Q7Z4B0 112 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 OR8I2Q8N0Y5 310 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 B9D2Q9BPU9 175 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
CPSF1-206ENST00000531480 SH3BGRL3Q9H299 93 aa10.75□□□□□ -0.69
CPSF1-206ENST00000531480 IGKV3-7A0A075B6H7 116 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 CTXND1A0A1B0GTU2 59 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
CPSF1-206ENST00000531480 COX7A2P2O60397 106 aa10.74□□□□□ -0.69
CPSF1-206ENST00000531480 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
CPSF1-206ENST00000531480 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
CPSF1-206ENST00000531480 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms