RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 MIC13Q5XKP0 118 aa14.02□□□□□ -0.17
PACSIN3-208ENST00000531226 CHAC2Q8WUX2 184 aa14.02□□□□□ -0.17
PACSIN3-208ENST00000531226 MPDU1O75352 247 aa14.01□□□□□ -0.17
PACSIN3-208ENST00000531226 RPL29P47914 159 aaKnown RBP14.01□□□□□ -0.17
PACSIN3-208ENST00000531226 CLINT1Q14677 625 aa14.01□□□□□ -0.17
PACSIN3-208ENST00000531226 RNF24Q9Y225 148 aa14.01□□□□□ -0.17
PACSIN3-208ENST00000531226 HSPB11Q9Y547 144 aa14.01□□□□□ -0.17
PACSIN3-208ENST00000531226 COX7A2P2O60397 106 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 RPL7P18124 248 aaKnown RBP14□□□□□ -0.17
PACSIN3-208ENST00000531226 ID1P41134 155 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 PSMB3P49720 205 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 MEOX2P50222 304 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 SAMD13Q5VXD3 122 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 Q6ZRG5 221 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 Q6ZWC4 215 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 STHQ8IWL8 128 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 THAP6Q8TBB0 222 aa14□□□□□ -0.17
PACSIN3-208ENST00000531226 ELOA3CA0A087WX78 387 aaPredicted RBP13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 KNCNA6PVL3 124 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 RPL12P30050 165 aaKnown RBP13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 B2MP61769 119 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 LINC00305Q7Z4B0 112 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 ASB13Q8WXK3 278 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 TMEM37Q8WXS4 190 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 C17orf77Q96MU5 243 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 RSG1Q9BU20 258 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 NPCDR1Q9BY65 106 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 CSTL1Q9H114 145 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 SLC39A9Q9NUM3 307 aa13.99□□□□□ -0.17
PACSIN3-208ENST00000531226 NBEAL2Q6ZNJ1 2754 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 ISLRO14498 428 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 GIPP09681 153 aaPredicted RBP13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 DEFB135Q30KP9 77 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 ACTL10Q5JWF8 245 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 C10orf113Q5VZT2 155 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 TRPT1Q86TN4 253 aaKnown RBP13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 OR1L4Q8NGR5 311 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 ATP5SQ99766 215 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 OVOL2Q9BRP0 275 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 TP53TG1Q9Y2A0 90 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 PXMP4Q9Y6I8 212 aa13.98□□□□□ -0.17
PACSIN3-208ENST00000531226 ATF4P18848 351 aaPredicted RBP13.97□□□□□ -0.17
PACSIN3-208ENST00000531226 PFDN5Q99471 154 aa13.97□□□□□ -0.17
PACSIN3-208ENST00000531226 WDR61Q9GZS3 305 aaKnown RBP13.97□□□□□ -0.17
PACSIN3-208ENST00000531226 DNAJC4Q9NNZ3 241 aa13.97□□□□□ -0.17
PACSIN3-208ENST00000531226 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.17
PACSIN3-208ENST00000531226 FGL1Q08830 312 aa13.96□□□□□ -0.17
PACSIN3-208ENST00000531226 C16orf92Q96LL3 132 aa13.96□□□□□ -0.17
PACSIN3-208ENST00000531226 LINC00052Q96N35 136 aa13.96□□□□□ -0.17
PACSIN3-208ENST00000531226 EDA2RQ9HAV5 297 aa13.96□□□□□ -0.17
PACSIN3-208ENST00000531226 A0A087X0K7 114 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 SPRY2O43597 315 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 MORN5Q5VZ52 161 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 RNF183Q96D59 192 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 SMIM3Q9BZL3 60 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 KCNIP2Q9NS61 270 aa13.95□□□□□ -0.18
PACSIN3-208ENST00000531226 CA1P00915 261 aaPredicted RBP13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 SPP1P10451 314 aa13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 HLA-DRB4P13762 266 aa13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 MORN3Q6PF18 240 aaPredicted RBP13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 BPIFA4PQ86YQ2 179 aa13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 GATAD1Q8WUU5 269 aa13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 HLA-DRB4X5D2U9 266 aa13.94□□□□□ -0.18
PACSIN3-208ENST00000531226 H3BMM0 161 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 Q5BKY6 102 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 GDF5OSQ5U4N7 250 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 FOXI2Q6ZQN5 318 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 ZNF709Q8N972 641 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 C20orf173Q96LM9 149 aa13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 SAV1Q9H4B6 383 aaPredicted RBP13.93□□□□□ -0.18
PACSIN3-208ENST00000531226 TRAV8-2A0A0B4J237 113 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 C17orf112F2Z3M2 114 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 IFNA5P01569 189 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 DEFB1P60022 68 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 PARD6GQ9BYG4 376 aaPredicted RBP13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
PACSIN3-208ENST00000531226 GIG44P09565 113 aaPredicted RBP13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 CXCL2P19875 107 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 C4BPBP20851 252 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 TMEM41BQ5BJD5 291 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 GCSAMLQ5JQS6 135 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 SPATA31B1PQ5VZV4 182 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 LCN15Q6UWW0 184 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
PACSIN3-208ENST00000531226 TRAV5A0A0B4J249 113 aa13.9□□□□□ -0.18
PACSIN3-208ENST00000531226 IGLC2P0DOY2 106 aa13.9□□□□□ -0.18
PACSIN3-208ENST00000531226 IGFL4Q6B9Z1 124 aa13.9□□□□□ -0.18
PACSIN3-208ENST00000531226 OR2T35Q8NGX2 323 aa13.9□□□□□ -0.18
PACSIN3-208ENST00000531226 A0A0J9YX75 114 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 F6UB75 175 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 NUTF2P61970 127 aaKnown RBP13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 FAM78BQ5VT40 261 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 EBLN2Q6P2I7 272 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 MUC7Q8TAX7 377 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 LRRC20Q8TCA0 184 aa13.89□□□□□ -0.19
PACSIN3-208ENST00000531226 CLUHP3Q96NS8 147 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms