RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZNF773Q6PK81 442 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 FAM159AQ6UWV7 190 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 APRG1Q8IVJ8 170 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 OR1L8Q8NGR8 309 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 GIMAP1Q8WWP7 306 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 FCGR1BQ92637 280 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 SLC25A38Q96DW6 304 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 CHRDL1Q9BU40 450 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 SMPXQ9UHP9 88 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 SSR3Q9UNL2 185 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 OR51B2Q9Y5P1 312 aa4.65□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV7-4-1A0A0J9YVY3 117 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 K7EIM0 57 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 NUPL2O15504 423 aaKnown RBP4.64□□□□□ -1.67
CSDE1-213ENST00000530784 SNAPC5O75971 98 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 YIF1AO95070 293 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 DUSP14O95147 198 aaKnown RBP4.64□□□□□ -1.67
CSDE1-213ENST00000530784 KRASP01116 189 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 IFNA4P05014 189 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 CT45A10P0DMU9 189 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 F2RP25116 425 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 SDC2P34741 201 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 MXD1Q05195 221 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 C2orf83Q53S99 150 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 IDNKQ5T6J7 187 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 CENPSQ8N2Z9 138 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 OR5H6Q8NGV6 325 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 TMEM56Q96MV1 263 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 RNF2Q99496 336 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 TSC22D3Q99576 134 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 RARRES2Q99969 163 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 RHPN1-AS1Q9BWJ2 59 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 C11orf68Q9H3H3 251 aaKnown RBP4.64□□□□□ -1.67
CSDE1-213ENST00000530784 AUNIPQ9H7T9 357 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 IFT46Q9NQC8 304 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 DIABLOQ9NR28 239 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 NDUFA4L2Q9NRX3 87 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 EHFQ9NZC4 300 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 MBD2Q9UBB5 411 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 PRNDQ9UKY0 176 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
CSDE1-213ENST00000530784 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
CSDE1-213ENST00000530784 IGKV3-7A0A075B6H7 116 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 LOC100506127A0A0U1RQW1 187 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 MEIS3P1A6NDR6 274 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 PGLYRP1O75594 196 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-213ENST00000530784 CA1P00915 261 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-213ENST00000530784 EIF4EP06730 217 aaKnown RBP4.63□□□□□ -1.67
CSDE1-213ENST00000530784 CTSGP08311 255 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 GNRHRP30968 328 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 G6PCP35575 357 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 LPAR6P43657 344 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 TCTAP57738 103 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 PAFAH1B2P68402 229 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 CMTM1Q8IZ96 169 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 OR1P1Q8NH06 330 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 OR11H2Q8NH07 326 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 SLC25A46Q96AG3 418 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 DGCR14Q96DF8 476 aaKnown RBP4.63□□□□□ -1.67
CSDE1-213ENST00000530784 OR10C1Q96KK4 312 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 GINS3Q9BRX5 216 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 ZNF2Q9BSG1 426 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-213ENST00000530784 FKBP11Q9NYL4 201 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 RAB26Q9ULW5 256 aa4.63□□□□□ -1.67
CSDE1-213ENST00000530784 TNCP24821 2201 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3OR16-13A0A075B7E8 117 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 TRAV14DV4A0A0A6YYC5 116 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3-74A0A0B4J1X5 117 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 I3L2K1 104 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 GPR31O00270 319 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 GNG7O60262 68 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 PMP2P02689 132 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 CD5P06127 495 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 S100GP29377 79 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 ALDH3B2P48448 385 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 TAS2R46P59540 309 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 TCF24Q7RTU0 167 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 OR5H2Q8NGV7 314 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 PINX1Q96BK5 328 aaKnown RBP4.62□□□□□ -1.67
CSDE1-213ENST00000530784 S100A16Q96FQ6 103 aaKnown RBP4.62□□□□□ -1.67
CSDE1-213ENST00000530784 TXN2Q99757 166 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 NXF2Q9GZY0 626 aaKnown RBP4.62□□□□□ -1.67
CSDE1-213ENST00000530784 FXYD6Q9H0Q3 95 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 RNF167Q9H6Y7 350 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 TMEM14BQ9NUH8 114 aa4.62□□□□□ -1.67
CSDE1-213ENST00000530784 C11orf94C9JXX5 98 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 DNASE2O00115 360 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-213ENST00000530784 DEFB4AO15263 64 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 MT-CO2P00403 227 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 IGHV3-48P01763 117 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 TAS2R20P59543 309 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 DEFB131AP59861 70 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 PRCDQ00LT1 54 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 ASAH1Q13510 395 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 GAMTQ14353 236 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 UBE2NLQ5JXB2 153 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 TMEM69Q5SWH9 247 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 VSIG2Q96IQ7 327 aa4.61□□□□□ -1.67
CSDE1-213ENST00000530784 Q9H521 79 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms