RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 RPL12P30050 165 aaKnown RBP8.88□□□□□ -0.99
USH1C-208ENST00000529563 AP2S1P53680 142 aaPredicted RBP8.88□□□□□ -0.99
USH1C-208ENST00000529563 CLINT1Q14677 625 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 Q6ZRG5 221 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 OR5C1Q8NGR4 320 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 SCGB1C1Q8TD33 95 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 VSIRQ9H7M9 311 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
USH1C-208ENST00000529563 FXYD6-FXYD2A0A087WZ82 144 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 PMS2P5A8MQ11 134 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 PRSS46E5RG02 174 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 HYPMO75409 117 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 LINC00869P0C866 280 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 FGF7P21781 194 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 CRYBB3P26998 211 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 CAMLGP49069 296 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 NHLH2Q02577 135 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
USH1C-208ENST00000529563 OR2T35Q8NGX2 323 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 ZNF414Q96IQ9 312 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 KCNIP2Q9NS61 270 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 DOK5Q9P104 306 aa8.87□□□□□ -0.99
USH1C-208ENST00000529563 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 AGPAT2O15120 278 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 COX7A2P2O60397 106 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 MPDU1O75352 247 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 SPP1P10451 314 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 ARL16Q0P5N6 197 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 USF2Q15853 346 aaPredicted RBP8.86□□□□□ -0.99
USH1C-208ENST00000529563 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 OR8I2Q8N0Y5 310 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 FAM24BQ8N5W8 94 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 ARL6Q9H0F7 186 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 SLC25A22Q9H936 323 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
USH1C-208ENST00000529563 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 TRAV10A0A0B4J240 114 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 H0YIZ8 118 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 MIFP14174 115 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 GATA2P23769 480 aaPredicted RBP8.85□□□□□ -0.99
USH1C-208ENST00000529563 HLA-DMBP28068 263 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 PXDC1Q5TGL8 231 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 OR1L4Q8NGR5 311 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 ATP5SQ99766 215 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 RNF126Q9BV68 326 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 C11orf1Q9H5F2 150 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 HSPB11Q9Y547 144 aa8.85□□□□□ -0.99
USH1C-208ENST00000529563 FRAS1Q86XX4 4008 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 IGKV1OR2-108A0A075B7D4 117 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 GALR1P47211 349 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PRR20EP86478 221 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PRR20CP86479 221 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PRR20DP86480 221 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PRR20BP86481 221 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PRR20AP86496 221 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 PFDN5Q99471 154 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 HRH4Q9H3N8 390 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 CLEC5AQ9NY25 188 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 SLC45A2Q9UMX9 530 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 WDR83OSQ9Y284 106 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
USH1C-208ENST00000529563 hCG_2014768A0A024R1R8 64 aa8.83□□□□□ -1
USH1C-208ENST00000529563 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
USH1C-208ENST00000529563 ELOA3CA0A087WX78 387 aaPredicted RBP8.83□□□□□ -1
USH1C-208ENST00000529563 K7EQG2 157 aa8.83□□□□□ -1
USH1C-208ENST00000529563 NUTF2P61970 127 aaKnown RBP8.83□□□□□ -1
USH1C-208ENST00000529563 SNRPD3P62318 126 aaKnown RBP8.83□□□□□ -1
USH1C-208ENST00000529563 ZNF266Q14584 549 aa8.83□□□□□ -1
USH1C-208ENST00000529563 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
USH1C-208ENST00000529563 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
USH1C-208ENST00000529563 C16orf54Q6UWD8 224 aa8.83□□□□□ -1
USH1C-208ENST00000529563 Q6ZTC4 211 aa8.83□□□□□ -1
USH1C-208ENST00000529563 TRPT1Q86TN4 253 aaKnown RBP8.83□□□□□ -1
USH1C-208ENST00000529563 Q8NAQ8 132 aa8.83□□□□□ -1
USH1C-208ENST00000529563 LRRC20Q8TCA0 184 aa8.83□□□□□ -1
USH1C-208ENST00000529563 GPR82Q96P67 336 aa8.83□□□□□ -1
USH1C-208ENST00000529563 APLNQ9ULZ1 77 aa8.83□□□□□ -1
USH1C-208ENST00000529563 BORCS7-ASMTA0A0B4J1R7 106 aa8.82□□□□□ -1
USH1C-208ENST00000529563 RBMY1A1P0DJD3 496 aaKnown RBP8.82□□□□□ -1
USH1C-208ENST00000529563 RBMY1CP0DJD4 496 aa8.82□□□□□ -1
USH1C-208ENST00000529563 ID1P41134 155 aa8.82□□□□□ -1
USH1C-208ENST00000529563 B2MP61769 119 aa8.82□□□□□ -1
USH1C-208ENST00000529563 RBMY1FQ15415 496 aaKnown RBP8.82□□□□□ -1
USH1C-208ENST00000529563 VWC2Q2TAL6 325 aa8.82□□□□□ -1
USH1C-208ENST00000529563 MIC13Q5XKP0 118 aa8.82□□□□□ -1
USH1C-208ENST00000529563 MGST2Q99735 147 aa8.82□□□□□ -1
USH1C-208ENST00000529563 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
USH1C-208ENST00000529563 ARV1Q9H2C2 271 aa8.82□□□□□ -1
USH1C-208ENST00000529563 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
USH1C-208ENST00000529563 DEFB131BA0A096LNP1 70 aa8.81□□□□□ -1
USH1C-208ENST00000529563 ZNF98A6NK75 572 aa8.81□□□□□ -1
USH1C-208ENST00000529563 BUB3O43684 328 aa8.81□□□□□ -1
USH1C-208ENST00000529563 RPL7P18124 248 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms