RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GIG44P09565 113 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-216ENST00000528739 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 RPL7P18124 248 aaKnown RBP10.41□□□□□ -0.74
CAPN1-216ENST00000528739 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-216ENST00000528739 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 NRARPQ7Z6K4 114 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 ZNF546Q86UE3 836 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 STX12Q86Y82 276 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 PHLDA1Q8WV24 401 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-216ENST00000528739 SHANK2-AS3Q9BTD1 123 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 MFFQ9GZY8 342 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 ARV1Q9H2C2 271 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 SAV1Q9H4B6 383 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-216ENST00000528739 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
CAPN1-216ENST00000528739 IGHV4-28A0A0C4DH34 117 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 F6UB75 175 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 H3BRN7 92 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 MIFP14174 115 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 IFITM3Q01628 133 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 LRRC37A5PQ49AS3 106 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 IGFL4Q6B9Z1 124 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
CAPN1-216ENST00000528739 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
CAPN1-216ENST00000528739 SOCS3O14543 225 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 PRAF2O60831 178 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 CAMLGP49069 296 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 HBG1P69891 147 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 HBG2P69892 147 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 BAXQ07812 192 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 FAM78BQ5VT40 261 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 Q6ZRG5 221 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
CAPN1-216ENST00000528739 UBE2L5PA0A1B0GUS4 154 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 SSNA1O43805 119 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 LY6G6CO95867 125 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
CAPN1-216ENST00000528739 S100A11P31949 105 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 SULT1A1P50225 295 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 PLP1P60201 277 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 PSG9Q00887 426 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 TMEM252Q8N6L7 170 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 MGST2Q99735 147 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 LYRM2Q9NU23 88 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-216ENST00000528739 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 RYR3Q15413 4870 aa10.38□□□□□ -0.75
CAPN1-216ENST00000528739 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 ZNF705EA8MWA4 302 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-216ENST00000528739 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
CAPN1-216ENST00000528739 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
CAPN1-216ENST00000528739 MIC13Q5XKP0 118 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 RNF182Q8N6D2 247 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 Q8NAQ8 132 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
CAPN1-216ENST00000528739 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-216ENST00000528739 A0A0J9YX75 114 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-216ENST00000528739 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-216ENST00000528739 FGF7P21781 194 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 EMP1P54849 157 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 RHOBP62745 196 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 CYCSP99999 105 aaKnown RBP10.36□□□□□ -0.75
CAPN1-216ENST00000528739 ATP6V1FQ16864 119 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 PATE2Q6UY27 113 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 SLC25A31Q9H0C2 315 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 GOLT1BQ9Y3E0 138 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 X6R8D5 127 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 AGRNO00468 2067 aa10.36□□□□□ -0.75
CAPN1-216ENST00000528739 E5RGE8 158 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 DUSP14O95147 198 aaKnown RBP10.35□□□□□ -0.75
CAPN1-216ENST00000528739 IL15RAQ13261 267 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 NMES1Q9C002 83 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 C11orf1Q9H5F2 150 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
CAPN1-216ENST00000528739 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 H3BTX0 84 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-216ENST00000528739 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 B2MP61769 119 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-216ENST00000528739 NHLH2Q02577 135 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 C2CD4CQ8TF44 421 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 MARVELD1Q9BSK0 173 aa10.34□□□□□ -0.75
CAPN1-216ENST00000528739 IGLL5B9A064 214 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms