RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 PFDN5Q99471 154 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 ATP5SQ99766 215 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 SCRT1Q9BWW7 348 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 NPCDR1Q9BY65 106 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 ISLRO14498 428 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 AQP10Q96PS8 301 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 WDR61Q9GZS3 305 aaKnown RBP12.75□□□□□ -0.37
LMX1B-203ENST00000526117 DNAJC4Q9NNZ3 241 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 SLC39A9Q9NUM3 307 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 DOK5Q9P104 306 aa12.75□□□□□ -0.37
LMX1B-203ENST00000526117 A0A087X0K7 114 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 ID1P41134 155 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 B2MP61769 119 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 MIC13Q5XKP0 118 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 Q6ZWC4 215 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 LINC00305Q7Z4B0 112 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
LMX1B-203ENST00000526117 CLINT1Q14677 625 aa12.73□□□□□ -0.37
LMX1B-203ENST00000526117 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
LMX1B-203ENST00000526117 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
LMX1B-203ENST00000526117 HUWE1Q7Z6Z7 4374 aaKnown RBP12.72□□□□□ -0.37
LMX1B-203ENST00000526117 STAB2Q8WWQ8 2551 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 MRPS12O15235 138 aaKnown RBP12.72□□□□□ -0.37
LMX1B-203ENST00000526117 CXCL2P19875 107 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 ZNF124Q15973 351 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
LMX1B-203ENST00000526117 NBEAL2Q6ZNJ1 2754 aa12.72□□□□□ -0.37
LMX1B-203ENST00000526117 TENM3Q9P273 2699 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 BPIFA4PQ86YQ2 179 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 STHQ8IWL8 128 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 ZNF709Q8N972 641 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 CLUHP3Q96NS8 147 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 RSG1Q9BU20 258 aa12.71□□□□□ -0.37
LMX1B-203ENST00000526117 IFNA5P01569 189 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 SPP1P10451 314 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 ATF4P18848 351 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-203ENST00000526117 TMEM41BQ5BJD5 291 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 Q5BKY6 102 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 OR2T35Q8NGX2 323 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 WWC2-AS2Q96NR7 200 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
LMX1B-203ENST00000526117 G3V3Q6 166 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 HLA-DRB4P13762 266 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 ZNF266Q14584 549 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 MORN3Q6PF18 240 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-203ENST00000526117 FOXI2Q6ZQN5 318 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 HLA-DRB4X5D2U9 266 aa12.69□□□□□ -0.38
LMX1B-203ENST00000526117 RPL35AP18077 110 aaKnown RBP12.68□□□□□ -0.38
LMX1B-203ENST00000526117 GUK1Q16774 197 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 SCGB1C1Q8TD33 95 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 HRH4Q9H3N8 390 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 SAV1Q9H4B6 383 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-203ENST00000526117 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 TMEM14CQ9P0S9 112 aa12.68□□□□□ -0.38
LMX1B-203ENST00000526117 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 H3BMM0 161 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 INO80EQ8NBZ0 244 aaPredicted RBP12.67□□□□□ -0.38
LMX1B-203ENST00000526117 RNF183Q96D59 192 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 OVOL2Q9BRP0 275 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
LMX1B-203ENST00000526117 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 WFDC1Q9HC57 220 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 TIMM9Q9Y5J7 89 aa12.67□□□□□ -0.38
LMX1B-203ENST00000526117 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
LMX1B-203ENST00000526117 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
LMX1B-203ENST00000526117 A8MTW9 85 aa12.66□□□□□ -0.38
LMX1B-203ENST00000526117 ZNF253O75346 499 aa12.66□□□□□ -0.38
LMX1B-203ENST00000526117 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
LMX1B-203ENST00000526117 SPRY2O43597 315 aa12.65□□□□□ -0.38
LMX1B-203ENST00000526117 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
LMX1B-203ENST00000526117 EDA2RQ9HAV5 297 aa12.65□□□□□ -0.38
LMX1B-203ENST00000526117 RETNQ9HD89 108 aa12.65□□□□□ -0.38
LMX1B-203ENST00000526117 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-203ENST00000526117 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
LMX1B-203ENST00000526117 A0A0J9YX75 114 aa12.64□□□□□ -0.39
LMX1B-203ENST00000526117 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
LMX1B-203ENST00000526117 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
LMX1B-203ENST00000526117 PDE6HQ13956 83 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms