RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SHANK2-AS3Q9BTD1 123 aa4.85□□□□□ -1.63
CD44-214ENST00000525211 PARD6GQ9BYG4 376 aaPredicted RBP4.85□□□□□ -1.63
CD44-214ENST00000525211 SLC25A39Q9BZJ4 359 aaPredicted RBP4.85□□□□□ -1.63
CD44-214ENST00000525211 SLC25A32Q9H2D1 315 aa4.85□□□□□ -1.63
CD44-214ENST00000525211 SEPSECSQ9HD40 501 aaKnown RBP4.85□□□□□ -1.63
CD44-214ENST00000525211 DAZ1Q9NQZ3 744 aaKnown RBP4.85□□□□□ -1.63
CD44-214ENST00000525211 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
CD44-214ENST00000525211 SIGLEC8Q9NYZ4 499 aa4.85□□□□□ -1.63
CD44-214ENST00000525211 UFC1Q9Y3C8 167 aa4.85□□□□□ -1.63
CD44-214ENST00000525211 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
CD44-214ENST00000525211 HMGB3O15347 200 aaKnown RBP4.84□□□□□ -1.63
CD44-214ENST00000525211 HYPMO75409 117 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 IFNA5P01569 189 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 OR5G3P0C626 314 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 PYYP10082 97 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 FHITP49789 147 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 EGFEM1PQ0D2K5 195 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 ZNF345Q14585 488 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 ZFP69Q49AA0 526 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
CD44-214ENST00000525211 C9orf66Q5T8R8 295 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 RPP25LQ8N5L8 163 aaKnown RBP4.84□□□□□ -1.63
CD44-214ENST00000525211 C20orf173Q96LM9 149 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 ARPC5LQ9BPX5 153 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 GINS3Q9BRX5 216 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 SLC25A2Q9BXI2 301 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 SLC25A22Q9H936 323 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 RABAC1Q9UI14 185 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
CD44-214ENST00000525211 ZNF256Q9Y2P7 627 aaPredicted RBP4.84□□□□□ -1.63
CD44-214ENST00000525211 TRAV8-2A0A0B4J237 113 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 A0A0D9SG52 128 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 H3BQ15 152 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 K7EIL1 84 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 SLC17A3O00476 420 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 SOCS3O14543 225 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
CD44-214ENST00000525211 SELENOTP62341 195 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 FAM74A1Q5RGS3 127 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 FAM122CQ6P4D5 195 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 LINC00305Q7Z4B0 112 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 SCGB1C1Q8TD33 95 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 DYNLRB2Q8TF09 96 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 HYLS1Q96M11 299 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 METTL26Q96S19 204 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
CD44-214ENST00000525211 MS4A6AQ9H2W1 248 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 ZMAT4Q9H898 229 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 DNAJC4Q9NNZ3 241 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 RPRMQ9NS64 109 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 AURKAIP1Q9NWT8 199 aaPredicted RBP4.83□□□□□ -1.64
CD44-214ENST00000525211 UBQLN2Q9UHD9 624 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 PLA2G2DQ9UNK4 145 aa4.83□□□□□ -1.64
CD44-214ENST00000525211 K7EQG2 157 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 TSPAN4O14817 238 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 COX7A2P2O60397 106 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 PFDN1O60925 122 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 MPDU1O75352 247 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 NDUFB4O95168 129 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 SPP1P10451 314 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 GP9P14770 177 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 C10orf113Q5VZT2 155 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 OR2G3Q8NGZ4 309 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 MARC2Q969Z3 335 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 ZNF586Q9NXT0 402 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
CD44-214ENST00000525211 TIMM9Q9Y5J7 89 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 AGRNO00468 2067 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 NBEAL2Q6ZNJ1 2754 aa4.82□□□□□ -1.64
CD44-214ENST00000525211 BORCS7-ASMTA0A0B4J1R7 106 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 F6UB75 175 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 TAAR5O14804 337 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 FABP1P07148 127 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 OR10J4P0C629 311 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 ZNF688P0C7X2 276 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 IGLC2P0DOY2 106 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 M6PRP20645 277 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 FGF8P55075 233 aaPredicted RBP4.81□□□□□ -1.64
CD44-214ENST00000525211 CCL20P78556 96 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 ZNF266Q14584 549 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 GDF5OSQ5U4N7 250 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 SIGLEC15Q6ZMC9 328 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 BAP18Q8IXM2 172 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 OR8I2Q8N0Y5 310 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 DEFB125Q8N687 156 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 RNF182Q8N6D2 247 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 ZNF709Q8N972 641 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 OR10G4Q8NGN3 311 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 OR10G9Q8NGN4 311 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 OR10G7Q8NGN6 311 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms