RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IGLL5B9A064 214 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 C11orf94C9JXX5 98 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 H3BRN7 92 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 H2AFB2P0C5Z0 115 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 PSG9Q00887 426 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF431Q8TF32 576 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-203ENST00000525013 SHANK2-AS3Q9BTD1 123 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 ARL6Q9H0F7 186 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
CAPN1-203ENST00000525013 LSM5Q9Y4Y9 91 aaKnown RBP13.39□□□□□ -0.27
CAPN1-203ENST00000525013 A0A0J9YX75 114 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 FAM240BA0A1B0GVZ2 78 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 FNDC10F2Z333 226 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 SLC38A11Q08AI6 406 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 ARL16Q0P5N6 197 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 LGALS9CQ6DKI2 356 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 Q6ZTC4 211 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 C12orf45Q8N5I9 185 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-203ENST00000525013 C17orf77Q96MU5 243 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 UHRF2Q96PU4 802 aa13.38□□□□□ -0.27
CAPN1-203ENST00000525013 EPPK1P58107 5090 aaKnown RBP13.37□□□□□ -0.27
CAPN1-203ENST00000525013 GOSR2O14653 212 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 RPL7P18124 248 aaKnown RBP13.37□□□□□ -0.27
CAPN1-203ENST00000525013 BCAP31P51572 246 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 MZT2BQ6NZ67 158 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF705AQ6ZN79 300 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF767PQ75MW2 155 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 S100A7AQ86SG5 101 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF709Q8N972 641 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 CELA1Q9UNI1 258 aa13.37□□□□□ -0.27
CAPN1-203ENST00000525013 TRAV10A0A0B4J240 114 aa13.36□□□□□ -0.27
CAPN1-203ENST00000525013 EMP1P54849 157 aa13.36□□□□□ -0.27
CAPN1-203ENST00000525013 PLP1P60201 277 aa13.36□□□□□ -0.27
CAPN1-203ENST00000525013 GGACTQ9BVM4 153 aa13.36□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-203ENST00000525013 K7EPK0 472 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 DEDDO75618 318 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-203ENST00000525013 CAV2P51636 162 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 TCTAP57738 103 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
CAPN1-203ENST00000525013 RNF182Q8N6D2 247 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 C2orf50Q96LR7 162 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 NEU1Q99519 415 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 GOLT1BQ9Y3E0 138 aa13.35□□□□□ -0.27
CAPN1-203ENST00000525013 TRAV8-2A0A0B4J237 113 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 AGPAT2O15120 278 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 S100A10P60903 97 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 C12orf74Q32Q52 190 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 PATE2Q6UY27 113 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 LRRC20Q8TCA0 184 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 ARV1Q9H2C2 271 aa13.34□□□□□ -0.27
CAPN1-203ENST00000525013 CST7O76096 145 aa13.33□□□□□ -0.28
CAPN1-203ENST00000525013 DUSP14O95147 198 aaKnown RBP13.33□□□□□ -0.28
CAPN1-203ENST00000525013 PVALBP20472 110 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-203ENST00000525013 PXDC1Q5TGL8 231 aa13.33□□□□□ -0.28
CAPN1-203ENST00000525013 APLNQ9ULZ1 77 aa13.33□□□□□ -0.28
CAPN1-203ENST00000525013 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
CAPN1-203ENST00000525013 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
CAPN1-203ENST00000525013 DEFB131BA0A096LNP1 70 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 TMEM189A5PLL7 270 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 COX7A2P2O60397 106 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 CNN1P51911 297 aaKnown RBP13.32□□□□□ -0.28
CAPN1-203ENST00000525013 ASAH1Q13510 395 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 RAB31Q13636 194 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 MGST2Q99735 147 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
CAPN1-203ENST00000525013 IGHV4-4A0A075B6R2 117 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 HBE1P02100 147 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 AMTNQ6UX39 209 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 C1orf158Q8N1D5 194 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 ENKURQ8TC29 256 aa13.31□□□□□ -0.28
CAPN1-203ENST00000525013 A0A087X0K7 114 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 A8MTW9 85 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 CAMLGP49069 296 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 OR11H7Q8NGC8 314 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 IGF2BP2-AS1Q96M15 143 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 C11orf1Q9H5F2 150 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 KMT2AQ03164 3969 aa13.3□□□□□ -0.28
CAPN1-203ENST00000525013 LOC102723971A0A1B0GUV8 181 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 M0R2Z0 102 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 AMBPP02760 352 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 SNRPCP09234 159 aaKnown RBP13.29□□□□□ -0.28
CAPN1-203ENST00000525013 CXCL3P19876 107 aa13.29□□□□□ -0.28
CAPN1-203ENST00000525013 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-203ENST00000525013 RAB32Q13637 225 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms