RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CLDND2Q8NHS1 167 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 RNASE11Q8TAA1 199 aaKnown RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 FAM213BQ8TBF2 198 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 RTN4IP1Q8WWV3 396 aaPredicted RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 TVP23CQ96ET8 276 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 GPR82Q96P67 336 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 SPACA5Q96QH8 159 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 EIF5A2Q9GZV4 153 aaKnown RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 SLC25A31Q9H0C2 315 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 SH3BGRL3Q9H299 93 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 SLC2A9Q9NRM0 540 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 MED29Q9NX70 200 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 GSKIPQ9P0R6 139 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 ZNF391Q9UJN7 358 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 NXT1Q9UKK6 140 aaKnown RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 LSM5Q9Y4Y9 91 aaKnown RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 TNRC18O15417 2968 aaPredicted RBP3.4□□□□□ -1.87
SKP1-213ENST00000524288 PTPRBP23467 1997 aa3.4□□□□□ -1.87
SKP1-213ENST00000524288 SEC16AO15027 2179 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 F5P12259 2224 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 A0A1B0GX78 115 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 TSTD3H0UI37 97 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 GEMIN2O14893 280 aaKnown RBP3.39□□□□□ -1.87
SKP1-213ENST00000524288 PDCD6O75340 191 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 SOD3P08294 240 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 GIMD1P0DJR0 217 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 OR13C7P0DN81 318 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 FGF7P21781 194 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 TAS2R30P59541 319 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 JOSD1Q15040 202 aaPredicted RBP3.39□□□□□ -1.87
SKP1-213ENST00000524288 GUSBP1Q15486 140 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 NMSQ5H8A3 153 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 SPNS3Q6ZMD2 512 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 SLC25A26Q70HW3 274 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 C6orf201Q7Z4U5 140 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 STX12Q86Y82 276 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 PDPNQ86YL7 162 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 OSR2Q8N2R0 312 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 MBD3L1Q8WWY6 194 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 METTL26Q96S19 204 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 GPER1Q99527 375 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 PSMG3Q9BT73 122 aaPredicted RBP3.39□□□□□ -1.87
SKP1-213ENST00000524288 SMIM3Q9BZL3 60 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 TMEM222Q9H0R3 208 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 METTL9Q9H1A3 318 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 ZNF286AQ9HBT8 521 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 SDHAF3Q9NRP4 125 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 AK3Q9UIJ7 227 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 POLR1DQ9Y2S0 133 aa3.39□□□□□ -1.87
SKP1-213ENST00000524288 BRCA2P51587 3418 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 CHD9Q3L8U1 2897 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 MKI67P46013 3256 aaKnown RBP3.38□□□□□ -1.87
SKP1-213ENST00000524288 IGHV1-3A0A0C4DH29 117 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 OR6C6A6NF89 314 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 C9J4A7 227 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 H0Y980 276 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 CLDN34H7C241 214 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 RER1O15258 196 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 NAPSAO96009 420 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 PRH1P02810 166 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TYMSP04818 313 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TRGC1P0CF51 173 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 BCL2P10415 239 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 NDUFA6P56556 154 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 RBM11P57052 281 aaKnown RBP3.38□□□□□ -1.87
SKP1-213ENST00000524288 CCL20P78556 96 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 HLA-DRB3P79483 266 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 CCL7P80098 99 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 H3F3AP84243 136 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TAF9Q16594 264 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 AKIRIN2Q53H80 203 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 CYP2G1PQ6ZSU1 146 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 SELENOHQ8IZQ5 122 aaKnown RBP3.38□□□□□ -1.87
SKP1-213ENST00000524288 SLC35G3Q8N808 338 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 OR2M3Q8NG83 312 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 OR10D4PQ8NGN7 298 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 OR2V1Q8NHB1 315 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 MAFIPQ8WZ33 124 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 ACY3Q96HD9 319 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 LINC00477Q96M19 166 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TP53RKQ96S44 253 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 HIST1H2BLQ99880 126 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 PLEKHJ1Q9NW61 149 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 SLC7A11Q9UPY5 501 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TIMM9Q9Y5J7 89 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
SKP1-213ENST00000524288 COL27A1Q8IZC6 1860 aaPredicted RBP3.38□□□□□ -1.87
SKP1-213ENST00000524288 TRIOBPQ9H2D6 2365 aa3.38□□□□□ -1.87
SKP1-213ENST00000524288 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 C3orf85A0A1B0GTC6 90 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 A8MWP6 167 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 PPP5D1E7EU14 171 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 TMEM250H0YL14 139 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 M0R135 149 aa3.37□□□□□ -1.87
SKP1-213ENST00000524288 TOX3O15405 576 aaPredicted RBP3.37□□□□□ -1.87
SKP1-213ENST00000524288 GGCTO75223 188 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms