RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TAS2R30P59541 319 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-223ENST00000523125 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 C16orf92Q96LL3 132 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 GPR82Q96P67 336 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-223ENST00000523125 NPVFQ9HCQ7 196 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 RPRMQ9NS64 109 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 GSKIPQ9P0R6 139 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 DOK5Q9P104 306 aa8.88□□□□□ -0.99
VEGFA-223ENST00000523125 TRAV6A0A075B6T7 132 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 TRAV10A0A0B4J240 114 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 K7EPK0 472 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 CCSO14618 274 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 TSC22D2O75157 780 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 LINC00869P0C866 280 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 PSG9Q00887 426 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 IGFL4Q6B9Z1 124 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 EBLN2Q6P2I7 272 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 PATE2Q6UY27 113 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 C1orf158Q8N1D5 194 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
VEGFA-223ENST00000523125 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 HYPMO75409 117 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 SELENOTP62341 195 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 OR10P1Q8NGE3 313 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 SEC22CQ9BRL7 303 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 C11orf1Q9H5F2 150 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
VEGFA-223ENST00000523125 IGHV4-4A0A075B6R2 117 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 DEFB131BA0A096LNP1 70 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 OR5G3P0C626 314 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 RAP2BP61225 183 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 ZNF431Q8TF32 576 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-223ENST00000523125 CCDC32Q9BV29 185 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 RNF126Q9BV68 326 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 ARL6Q9H0F7 186 aa8.85□□□□□ -0.99
VEGFA-223ENST00000523125 AGPAT2O15120 278 aa8.84□□□□□ -0.99
VEGFA-223ENST00000523125 MRPS12O15235 138 aaKnown RBP8.84□□□□□ -0.99
VEGFA-223ENST00000523125 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
VEGFA-223ENST00000523125 S100A7P31151 101 aa8.84□□□□□ -0.99
VEGFA-223ENST00000523125 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
VEGFA-223ENST00000523125 MGAT4CQ9UBM8 478 aa8.84□□□□□ -0.99
VEGFA-223ENST00000523125 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
VEGFA-223ENST00000523125 A0A087X0K7 114 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 TMEM189A5PLL7 270 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
VEGFA-223ENST00000523125 AMBPP02760 352 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
VEGFA-223ENST00000523125 EMP1P54849 157 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 FGL1Q08830 312 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 IL15RAQ13261 267 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 ZNF846Q147U1 533 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 C12orf45Q8N5I9 185 aaPredicted RBP8.83□□□□□ -1
VEGFA-223ENST00000523125 OR11H7Q8NGC8 314 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 MGST2Q99735 147 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 ARV1Q9H2C2 271 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 DKK2Q9UBU2 259 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 GOLT1BQ9Y3E0 138 aa8.83□□□□□ -1
VEGFA-223ENST00000523125 C5orf51A6NDU8 294 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 FAM25EA8MYX2 175 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 M0R2Z0 102 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 GOSR2O14653 212 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 DUSP14O95147 198 aaKnown RBP8.82□□□□□ -1
VEGFA-223ENST00000523125 CXCL3P19876 107 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 PXDC1Q5TGL8 231 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 MORN5Q5VZ52 161 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 ZNF546Q86UE3 836 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 C2orf50Q96LR7 162 aa8.82□□□□□ -1
VEGFA-223ENST00000523125 LSM5Q9Y4Y9 91 aaKnown RBP8.82□□□□□ -1
VEGFA-223ENST00000523125 LOC102723971A0A1B0GUV8 181 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 FAM24AA6NFZ4 105 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 L7N2F9 121 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 CST7O76096 145 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 HBE1P02100 147 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 PRM2P04554 102 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
VEGFA-223ENST00000523125 VAMP2P63027 116 aa8.81□□□□□ -1
VEGFA-223ENST00000523125 PSG3Q16557 428 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms