RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 FCN2Q15485 313 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 STHQ8IWL8 128 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 OR5C1Q8NGR4 320 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 GPR82Q96P67 336 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 UHRF2Q96PU4 802 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 SHANK2-AS3Q9BTD1 123 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 RSG1Q9BU20 258 aa16.13■□□□□ 0.17
HOXA3-205ENST00000522456 SEPSECSQ9HD40 501 aaKnown RBP16.13■□□□□ 0.17
HOXA3-205ENST00000522456 H3BRN7 92 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 FGF7P21781 194 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 ID1P41134 155 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 PATE2Q6UY27 113 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 CSTL1Q9H114 145 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 ARV1Q9H2C2 271 aa16.12■□□□□ 0.17
HOXA3-205ENST00000522456 KNCNA6PVL3 124 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 COX7A2P2O60397 106 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 ACTL10Q5JWF8 245 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 MIC13Q5XKP0 118 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 Q6ZRG5 221 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 OR11H7Q8NGC8 314 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 LINC00052Q96N35 136 aa16.11■□□□□ 0.17
HOXA3-205ENST00000522456 PLECQ15149 4684 aaKnown RBP16.1■□□□□ 0.17
HOXA3-205ENST00000522456 CLINT1Q14677 625 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 OXA1LQ15070 435 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 Q6ZWC4 215 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 THAP6Q8TBB0 222 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 MBD2Q9UBB5 411 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 RNF24Q9Y225 148 aa16.1■□□□□ 0.17
HOXA3-205ENST00000522456 ELOA3CA0A087WX78 387 aaPredicted RBP16.09■□□□□ 0.17
HOXA3-205ENST00000522456 MPDU1O75352 247 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 JTBO76095 146 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 RPL7P18124 248 aaKnown RBP16.09■□□□□ 0.17
HOXA3-205ENST00000522456 RPL12P30050 165 aaKnown RBP16.09■□□□□ 0.17
HOXA3-205ENST00000522456 RPL29P47914 159 aaKnown RBP16.09■□□□□ 0.17
HOXA3-205ENST00000522456 MEOX2P50222 304 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 PRR20EP86478 221 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 PRR20CP86479 221 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 PRR20DP86480 221 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 PRR20BP86481 221 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 PRR20AP86496 221 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 DEFB135Q30KP9 77 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 C10orf113Q5VZT2 155 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 LINC00305Q7Z4B0 112 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 C16orf92Q96LL3 132 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 OVOL2Q9BRP0 275 aa16.09■□□□□ 0.17
HOXA3-205ENST00000522456 SPRY2O43597 315 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 ATF4P18848 351 aaPredicted RBP16.08■□□□□ 0.16
HOXA3-205ENST00000522456 PSMB3P49720 205 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 SAMD13Q5VXD3 122 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 IL17DQ8TAD2 202 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 CHAC2Q8WUX2 184 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 TMEM37Q8WXS4 190 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 DNAJC4Q9NNZ3 241 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 TP53TG1Q9Y2A0 90 aa16.08■□□□□ 0.16
HOXA3-205ENST00000522456 ISLRO14498 428 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 SOCS3O14543 225 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 B2MP61769 119 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 FGL1Q08830 312 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 OPCMLQ14982 345 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 TRPT1Q86TN4 253 aaKnown RBP16.07■□□□□ 0.16
HOXA3-205ENST00000522456 OR1L4Q8NGR5 311 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 SLC39A9Q9NUM3 307 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 HSPB11Q9Y547 144 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 PXMP4Q9Y6I8 212 aa16.07■□□□□ 0.16
HOXA3-205ENST00000522456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.06■□□□□ 0.16
HOXA3-205ENST00000522456 NPCDR1Q9BY65 106 aa16.06■□□□□ 0.16
HOXA3-205ENST00000522456 CA1P00915 261 aaPredicted RBP16.05■□□□□ 0.16
HOXA3-205ENST00000522456 RNF183Q96D59 192 aa16.05■□□□□ 0.16
HOXA3-205ENST00000522456 C17orf77Q96MU5 243 aa16.05■□□□□ 0.16
HOXA3-205ENST00000522456 PFDN5Q99471 154 aa16.05■□□□□ 0.16
HOXA3-205ENST00000522456 ATP5SQ99766 215 aa16.05■□□□□ 0.16
HOXA3-205ENST00000522456 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
HOXA3-205ENST00000522456 ALMS1Q8TCU4 4167 aa16.04■□□□□ 0.16
HOXA3-205ENST00000522456 ZNF709Q8N972 641 aa16.04■□□□□ 0.16
HOXA3-205ENST00000522456 WDR61Q9GZS3 305 aaKnown RBP16.04■□□□□ 0.16
HOXA3-205ENST00000522456 GIPP09681 153 aaPredicted RBP16.03■□□□□ 0.16
HOXA3-205ENST00000522456 SPP1P10451 314 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 MORN5Q5VZ52 161 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 MORN3Q6PF18 240 aaPredicted RBP16.03■□□□□ 0.16
HOXA3-205ENST00000522456 BPIFA4PQ86YQ2 179 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 LRRC20Q8TCA0 184 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 RPRMQ9NS64 109 aa16.03■□□□□ 0.16
HOXA3-205ENST00000522456 H3BMM0 161 aa16.02■□□□□ 0.16
HOXA3-205ENST00000522456 IFNA5P01569 189 aa16.02■□□□□ 0.16
HOXA3-205ENST00000522456 DEFB1P60022 68 aa16.02■□□□□ 0.16
HOXA3-205ENST00000522456 C17orf112F2Z3M2 114 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 HLA-DRB4P13762 266 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 GDF5OSQ5U4N7 250 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 IGFL4Q6B9Z1 124 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 EBLN2Q6P2I7 272 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 FOXI2Q6ZQN5 318 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 SCGB1C1Q8TD33 95 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 GATAD1Q8WUU5 269 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 C20orf173Q96LM9 149 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 SAV1Q9H4B6 383 aaPredicted RBP16.01■□□□□ 0.15
HOXA3-205ENST00000522456 KCNIP2Q9NS61 270 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 HLA-DRB4X5D2U9 266 aa16.01■□□□□ 0.15
HOXA3-205ENST00000522456 A0A087X0K7 114 aa16■□□□□ 0.15
HOXA3-205ENST00000522456 TRAV5A0A0B4J249 113 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms