RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	TRPT1	Q86TN4	253 aa	Known RBP	6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OR5C1	Q8NGR4	320 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	THAP6	Q8TBB0	222 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RNF183	Q96D59	192 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SHANK2-AS3	Q9BTD1	123 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	CLEC5A	Q9NY25	188 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SLC45A2	Q9UMX9	530 aa		6.14	□□□□□ -1.43
CTNNA1-231	ENST00000521941		F6UB75	175 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SOCS3	O14543	225 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MPC2	O95563	127 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PET100	P0DJ07	73 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PSMB3	P49720	205 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MEOX2	P50222	304 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PLP1	P60201	277 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	B2M	P61769	119 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PMS2P11	Q13670	270 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PATE2	Q6UY27	113 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941		Q6ZRG5	221 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	LINC00305	Q7Z4B0	112 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RNF182	Q8N6D2	247 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OR4B1	Q8NGF8	309 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OR11H2	Q8NH07	326 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	LRRC20	Q8TCA0	184 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	GPR82	Q96P67	336 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SMIM3	Q9BZL3	60 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SLC25A31	Q9H0C2	315 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MED28	Q9H204	178 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MBD2	Q9UBB5	411 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	WDR83OS	Q9Y284	106 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	TP53TG1	Q9Y2A0	90 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PXMP4	Q9Y6I8	212 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941	STAB2	Q8WWQ8	2551 aa		6.13	□□□□□ -1.43
CTNNA1-231	ENST00000521941		H3BTX0	84 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ISLR	O14498	428 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	DEFB4A	O15263	64 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SPP1	P10451	314 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	HLA-DRB4	P13762	266 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RPL7	P18124	248 aa	Known RBP	6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	CXCL3	P19876	107 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	HLA-DMB	P28068	263 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OPCML	Q14982	345 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	FCN2	Q15485	313 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ATP6V1F	Q16864	119 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	VWC2	Q2TAL6	325 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	CASC10	Q5T4H9	136 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MORN5	Q5VZ52	161 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	C10orf113	Q5VZT2	155 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MORN3	Q6PF18	240 aa	Predicted RBP	6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	S100A7A	Q86SG5	101 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ZNF738	Q8NE65	137 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	C20orf173	Q96LM9	149 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RARRES2	Q99969	163 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RPRM	Q9NS64	109 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SLC39A9	Q9NUM3	307 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	XCL2	Q9UBD3	114 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	HLA-DRB4	X5D2U9	266 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	NBEAL2	Q6ZNJ1	2754 aa		6.12	□□□□□ -1.43
CTNNA1-231	ENST00000521941	TRAV5	A0A0B4J249	113 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	CXorf65	A6NEN9	183 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941		H3BMM0	161 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ZNF705D	P0CH99	300 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ZNF705B	P0CI00	300 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PRR20E	P86478	221 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PRR20C	P86479	221 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PRR20D	P86480	221 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PRR20B	P86481	221 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PRR20A	P86496	221 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RGS21	Q2M5E4	152 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PXDC1	Q5TGL8	231 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	EBLN2	Q6P2I7	272 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	FOXI2	Q6ZQN5	318 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OR11H7	Q8NGC8	314 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	OR1L4	Q8NGR5	311 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	GATAD1	Q8WUU5	269 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	TMEM37	Q8WXS4	190 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	C17orf77	Q96MU5	243 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	PFDN5	Q99471	154 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	NPCDR1	Q9BY65	106 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SAV1	Q9H4B6	383 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SEPSECS	Q9HD40	501 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	HSPB11	Q9Y547	144 aa		6.11	□□□□□ -1.43
CTNNA1-231	ENST00000521941	DNAH7	Q8WXX0	4024 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	IGHV3OR16-12	A0A075B7B8	117 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	TRAV8-2	A0A0B4J237	113 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MPDU1	O75352	247 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	GIG44	P09565	113 aa	Predicted RBP	6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RPL12	P30050	165 aa	Known RBP	6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RPL29	P47914	159 aa	Known RBP	6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	NUTF2	P61970	127 aa	Known RBP	6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	GCSAML	Q5JQS6	135 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	FAM78B	Q5VT40	261 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	SAMD13	Q5VXD3	122 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	BPIFA4P	Q86YQ2	179 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ZNF709	Q8N972	641 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	IL17D	Q8TAD2	202 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	ATP5S	Q99766	215 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	RNF126	Q9BV68	326 aa		6.1	□□□□□ -1.43
CTNNA1-231	ENST00000521941	MFF	Q9GZY8	342 aa		6.1	□□□□□ -1.43

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