RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 LINC01619G3V211 115 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 K7EMT4 169 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 BMPR1BO00238 502 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 NDUFA4O00483 81 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 TGOLN2O43493 480 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 PDE6DO43924 150 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 COX7A2P2O60397 106 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 OR2J3O76001 311 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 TRBV12-3P01733 135 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 ELLP55199 621 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-206ENST00000519115 ZNF90Q03938 601 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 ZNF726P1Q15940 193 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 GUK1Q16774 197 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 FAM74A3Q4VXF1 159 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 C10orf91Q5T1B1 145 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 FAM78BQ5VT40 261 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 GPHB5Q86YW7 130 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 SLC7A5P1Q8MH63 180 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 RPUSD4Q96CM3 377 aaKnown RBP5.81□□□□□ -1.48
SDCBP-206ENST00000519115 SEC11CQ9BY50 192 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 SLC35B3Q9H1N7 401 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 VSIRQ9H7M9 311 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 SEPSECSQ9HD40 501 aaKnown RBP5.81□□□□□ -1.48
SDCBP-206ENST00000519115 CLEC5AQ9NY25 188 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 MRPL36Q9P0J6 103 aaKnown RBP5.81□□□□□ -1.48
SDCBP-206ENST00000519115 VAX2Q9UIW0 290 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 HIGD1AQ9Y241 93 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 S4R3C0 116 aa5.81□□□□□ -1.48
SDCBP-206ENST00000519115 NBEAL2Q6ZNJ1 2754 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 TMEM218A2RU14 115 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 GGCTO75223 188 aaKnown RBP5.8□□□□□ -1.48
SDCBP-206ENST00000519115 ZNF253O75346 499 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 IGHV3-23P01764 117 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 BCL2P10415 239 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 PDE6HQ13956 83 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 Q56UQ5 140 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 KPRPQ5T749 579 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-206ENST00000519115 PATE2Q6UY27 113 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 LINC00305Q7Z4B0 112 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 BPIFA4PQ86YQ2 179 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 DLX4Q92988 240 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-206ENST00000519115 RNF125Q96EQ8 232 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 SHANK2-AS3Q9BTD1 123 aa5.8□□□□□ -1.48
SDCBP-206ENST00000519115 A0A1W2PS18 150 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 OVOL1O14753 267 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 HIST1H1EP10412 219 aaKnown RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 RPL7P18124 248 aaKnown RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 CRYBB3P26998 211 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 GCHFRP30047 84 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 BMI1P35226 326 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 ADMP35318 185 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 KRTAP10-11P60412 298 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 CCL20P78556 96 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 MEF2BQ02080 365 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 TIGITQ495A1 244 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 FAM106AQ4KMX7 169 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 SAMD13Q5VXD3 122 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 FAM122CQ6P4D5 195 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 LCN15Q6UWW0 184 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 FAM167A-AS1Q96KT0 104 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 CCDC140Q96MF4 163 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 MCRIP2Q9BUT9 160 aaKnown RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 SLC25A39Q9BZJ4 359 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 EIF5A2Q9GZV4 153 aaKnown RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 OR51M1Q9H341 326 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 AURKAIP1Q9NWT8 199 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 PEF1Q9UBV8 284 aaKnown RBP5.79□□□□□ -1.48
SDCBP-206ENST00000519115 RABAC1Q9UI14 185 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 RFNGQ9Y644 331 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 U3KQE9 123 aa5.79□□□□□ -1.48
SDCBP-206ENST00000519115 IGHV3-21A0A0B4J1V1 117 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 LOC102723971A0A1B0GUV8 181 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 OR2T8A6NH00 312 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 FBLL1A6NHQ2 334 aaKnown RBP5.78□□□□□ -1.48
SDCBP-206ENST00000519115 ZNF98A6NK75 572 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 PPP5D1E7EU14 171 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 F6UZH7 168 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 LGALS9O00182 355 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 SAP30O75446 220 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
SDCBP-206ENST00000519115 ORM2P19652 201 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 ZP3P21754 424 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 NPPCP23582 126 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 SYNJ2BPP57105 145 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 RPEL1Q2QD12 228 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 C9orf66Q5T8R8 295 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 CLEC19AQ6UXS0 136 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 CCDC28AQ8IWP9 274 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 NARS2Q96I59 477 aaKnown RBP5.78□□□□□ -1.48
SDCBP-206ENST00000519115 CHRDL1Q9BU40 450 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 GPR61Q9BZJ8 451 aa5.78□□□□□ -1.48
SDCBP-206ENST00000519115 CARHSP1Q9Y2V2 147 aaKnown RBP5.78□□□□□ -1.48
SDCBP-206ENST00000519115 H3BRN7 92 aa5.77□□□□□ -1.49
SDCBP-206ENST00000519115 BUB3O43684 328 aa5.77□□□□□ -1.49
SDCBP-206ENST00000519115 IGHV3-48P01763 117 aa5.77□□□□□ -1.49
SDCBP-206ENST00000519115 IL4P05112 153 aa5.77□□□□□ -1.49
SDCBP-206ENST00000519115 NBEAP1P0C6P0 100 aa5.77□□□□□ -1.49
SDCBP-206ENST00000519115 ARL14EPLP0DKL9 152 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms