RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RAB31Q13636 194 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 ATP6V1FQ16864 119 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 UQCC1Q9NVA1 299 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
CLCN3-210ENST00000515420 CST7O76096 145 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 GIG44P09565 113 aaPredicted RBP9.33□□□□□ -0.92
CLCN3-210ENST00000515420 OR5G3P0C626 314 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 CHAC2Q8WUX2 184 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 MGST2Q99735 147 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 SCRT1Q9BWW7 348 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 ARL6Q9H0F7 186 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 SAV1Q9H4B6 383 aaPredicted RBP9.33□□□□□ -0.92
CLCN3-210ENST00000515420 DOK5Q9P104 306 aa9.33□□□□□ -0.92
CLCN3-210ENST00000515420 A0A087X0K7 114 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 E5RGE8 158 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 PTTG1O95997 202 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 C4BPBP20851 252 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 CAMLGP49069 296 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 PATE2Q6UY27 113 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 C17orf77Q96MU5 243 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 SLC25A31Q9H0C2 315 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 RPRMQ9NS64 109 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
CLCN3-210ENST00000515420 ZNF705EA8MWA4 302 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-210ENST00000515420 SSNA1O43805 119 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 MPDU1O75352 247 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 SIX6O95475 246 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PET100P0DJ07 73 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 CXCL2P19875 107 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 RPL29P47914 159 aaKnown RBP9.31□□□□□ -0.92
CLCN3-210ENST00000515420 H2BFSP57053 126 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PRR20EP86478 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PRR20CP86479 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PRR20DP86480 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PRR20BP86481 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 PRR20AP86496 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 BAXQ07812 192 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 Q6ZRG5 221 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 CSNK1G2-AS1Q8NCQ2 148 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 UHRF2Q96PU4 802 aa9.31□□□□□ -0.92
CLCN3-210ENST00000515420 A0A0J9YX75 114 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 UBE2L5PA0A1B0GUS4 154 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 MIFP14174 115 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 EBLN2Q6P2I7 272 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 PPP1R1CQ8WVI7 109 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 PFDN5Q99471 154 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 TENM2Q9NT68 2774 aa9.3□□□□□ -0.92
CLCN3-210ENST00000515420 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 A8MTW9 85 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
CLCN3-210ENST00000515420 EWSR1Q01844 656 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLCN3-210ENST00000515420 OPCMLQ14982 345 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 LRRC37A5PQ49AS3 106 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 GDF5OSQ5U4N7 250 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 BPIFA4PQ86YQ2 179 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 Q8NAQ8 132 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 OR1L4Q8NGR5 311 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 TMEM37Q8WXS4 190 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 MFFQ9GZY8 342 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 OR5AC2Q9NZP5 309 aa9.29□□□□□ -0.92
CLCN3-210ENST00000515420 LCE6AA0A183 80 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 H0YIZ8 118 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 MPC2O95563 127 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 FGF7P21781 194 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 B2MP61769 119 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 LCN15Q6UWW0 184 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 C20orf173Q96LM9 149 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 HRH4Q9H3N8 390 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 SLC39A9Q9NUM3 307 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 X6R8D5 127 aa9.28□□□□□ -0.92
CLCN3-210ENST00000515420 TRAV8-2A0A0B4J237 113 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
CLCN3-210ENST00000515420 CXCL3P19876 107 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 PSG9Q00887 426 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 NHLH2Q02577 135 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 FAM78BQ5VT40 261 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF709Q8N972 641 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 OR4B1Q8NGF8 309 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 NEU1Q99519 415 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 SLC50A1Q9BRV3 221 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms