RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SLC39A9Q9NUM3 307 aa10.31□□□□□ -0.76
USP46-209ENST00000514536 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
USP46-209ENST00000514536 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 MPDU1O75352 247 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 B2MP61769 119 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 FGL1Q08830 312 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
USP46-209ENST00000514536 C10orf113Q5VZT2 155 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 ASB13Q8WXK3 278 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 ATP5SQ99766 215 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
USP46-209ENST00000514536 PXMP4Q9Y6I8 212 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 DNAH9Q9NYC9 4486 aa10.3□□□□□ -0.76
USP46-209ENST00000514536 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
USP46-209ENST00000514536 ID1P41134 155 aa10.29□□□□□ -0.76
USP46-209ENST00000514536 APOC4P55056 127 aa10.29□□□□□ -0.76
USP46-209ENST00000514536 C17orf77Q96MU5 243 aa10.29□□□□□ -0.76
USP46-209ENST00000514536 LINC00052Q96N35 136 aa10.29□□□□□ -0.76
USP46-209ENST00000514536 WDR61Q9GZS3 305 aaKnown RBP10.29□□□□□ -0.76
USP46-209ENST00000514536 COL7A1Q02388 2944 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 SOCS3O14543 225 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 ACTL10Q5JWF8 245 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 STHQ8IWL8 128 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 OR1L4Q8NGR5 311 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 WFDC1Q9HC57 220 aa10.28□□□□□ -0.76
USP46-209ENST00000514536 KIR2DL5BA0A0G2JN68 375 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 KIR2DL5BA0A0G2JPC4 375 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 IFNA5P01569 189 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.76
USP46-209ENST00000514536 MEOX2P50222 304 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 KIR2DL5AQ8N109 375 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 ZNF709Q8N972 641 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 OR2T35Q8NGX2 323 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 SCGB1C1Q8TD33 95 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 C16orf92Q96LL3 132 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 PFDN5Q99471 154 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 CSTL1Q9H114 145 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 RNF24Q9Y225 148 aa10.27□□□□□ -0.76
USP46-209ENST00000514536 TRAV5A0A0B4J249 113 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 UBE2CO00762 179 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 ISLRO14498 428 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 PSMB3P49720 205 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 MRPS12O15235 138 aaKnown RBP10.26□□□□□ -0.77
USP46-209ENST00000514536 DEFB1P60022 68 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 Q6ZWC4 215 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 GATAD1Q8WUU5 269 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 C20orf173Q96LM9 149 aa10.26□□□□□ -0.77
USP46-209ENST00000514536 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
USP46-209ENST00000514536 DEFB135Q30KP9 77 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
USP46-209ENST00000514536 BPIFA4PQ86YQ2 179 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 WWC2-AS2Q96NR7 200 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 AQP10Q96PS8 301 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 KMT2CQ8NEZ4 4911 aaKnown RBP10.25□□□□□ -0.77
USP46-209ENST00000514536 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
USP46-209ENST00000514536 H3BMM0 161 aa10.24□□□□□ -0.77
USP46-209ENST00000514536 SPRY2O43597 315 aa10.24□□□□□ -0.77
USP46-209ENST00000514536 INO80EQ8NBZ0 244 aaPredicted RBP10.24□□□□□ -0.77
USP46-209ENST00000514536 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
USP46-209ENST00000514536 KCNIP2Q9NS61 270 aa10.24□□□□□ -0.77
USP46-209ENST00000514536 RFNGQ9Y644 331 aa10.24□□□□□ -0.77
USP46-209ENST00000514536 A0A087X0K7 114 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 G3V3Q6 166 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 GDF5OSQ5U4N7 250 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 FAM78BQ5VT40 261 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
USP46-209ENST00000514536 PARD6GQ9BYG4 376 aaPredicted RBP10.23□□□□□ -0.77
USP46-209ENST00000514536 F6UB75 175 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 SMLR1H3BR10 107 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 H3BTX0 84 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
USP46-209ENST00000514536 FFAR4Q5NUL3 377 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 RNF183Q96D59 192 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 SAV1Q9H4B6 383 aaPredicted RBP10.22□□□□□ -0.77
USP46-209ENST00000514536 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 RNF222A6NCQ9 220 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 H3BQ15 152 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 IGKV3-20P01619 116 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 GIG44P09565 113 aaPredicted RBP10.22□□□□□ -0.77
USP46-209ENST00000514536 SPP1P10451 314 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 HLA-DRB4P13762 266 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 SPATA31B1PQ5VZV4 182 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 EBLN2Q6P2I7 272 aa10.22□□□□□ -0.77
USP46-209ENST00000514536 MORN3Q6PF18 240 aaPredicted RBP10.22□□□□□ -0.77
USP46-209ENST00000514536 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms