RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	NMES1	Q9C002	83 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	FBXL17	Q9UF56	701 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	SMPX	Q9UHP9	88 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	RABAC1	Q9UI14	185 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340		E5RGE8	158 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340		F8W735	103 aa	Predicted RBP	5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340		H3BP45	60 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	IL4	P05112	153 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	SCGB1A1	P11684	91 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	S100A2	P29034	98 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	KRTAP10-11	P60412	298 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	FABP9	Q0Z7S8	132 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	ATP6V1F	Q16864	119 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	DMRTA1	Q5VZB9	504 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	TEPP	Q6URK8	271 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	ATRAID	Q6UW56	229 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	UNQ9165/PRO28630	Q6UXU0	137 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM144	Q7Z5S9	345 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	HSD17B11	Q8NBQ5	300 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	RNF2	Q99496	336 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	MED28	Q9H204	178 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	NPVF	Q9HCQ7	196 aa		5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	RCL1	Q9Y2P8	373 aa	Known RBP	5.66	□□□□□ -1.5
NR1I3-231	ENST00000512340	TRAV2	A0A0B4J234	112 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340		A0A1B0GV72	72 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	C7orf66	A4D0T2	115 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340		K7EIL1	84 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340		K7EPK0	472 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	CHEK1	O14757	476 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	ZNF207	O43670	478 aa	Known RBP	5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	DEDD	O75618	318 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGKV1-17	P01599	117 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	NPS	P0C0P6	89 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	FGF8	P55075	233 aa	Predicted RBP	5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	RPS20	P60866	119 aa	Known RBP	5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	RAP2B	P61225	183 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	MLANA	Q16655	118 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	FAM74A1	Q5RGS3	127 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM14EP	Q6UXP3	125 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	ACOT7L	Q6ZUV0	252 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	ZNF546	Q86UE3	836 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM61	Q8N0U2	210 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	STPG3	Q8N7X2	389 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	C15orf54	Q8N8G6	183 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	THAP6	Q8TBB0	222 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	RNF125	Q96EQ8	232 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	B9D2	Q9BPU9	175 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	PBDC1	Q9BVG4	233 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM147	Q9BVK8	224 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	ZMAT4	Q9H898	229 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	KCNIP2	Q9NS61	270 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	SLC45A2	Q9UMX9	530 aa		5.65	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGHV3OR16-8	A0A075B7F1	116 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	TMEM218	A2RU14	115 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340		A4D1N5	150 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR11H12	B2RN74	326 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	MPDU1	O75352	247 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	DFFB	O76075	338 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	NMB	P08949	121 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	PSG1	P11464	419 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	CRYBB3	P26998	211 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	P2RY1	P47900	373 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	SULT1A1	P50225	295 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	LYZ	P61626	148 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	SNRPD3	P62318	126 aa	Known RBP	5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	BAX	Q07812	192 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	SLC38A11	Q08AI6	406 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	RAB32	Q13637	225 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	C1orf194	Q5T5A4	169 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340		Q6ZRG5	221 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	TCF24	Q7RTU0	167 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	HAPLN4	Q86UW8	402 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZNF709	Q8N972	641 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	THAP8	Q8NA92	274 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	RNASE8	Q8TDE3	154 aa	Known RBP	5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	TMEM170A	Q8WVE7	144 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	GPR82	Q96P67	336 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	FAM110A	Q9BQ89	295 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	LYRM2	Q9NU23	88 aa	Predicted RBP	5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	UQCC1	Q9NVA1	299 aa		5.64	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZNF785	A8K8V0	405 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340		A8MZ25	164 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	HYPM	O75409	117 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	ID1	P41134	155 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	GALR1	P47211	349 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR2F1	Q13607	317 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	LRRC37A5P	Q49AS3	106 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	PET117	Q6UWS5	81 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	CYP2G1P	Q6ZSU1	146 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR8I2	Q8N0Y5	310 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	STXBP6	Q8NFX7	210 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	RXFP4	Q8TDU9	374 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	C2CD4C	Q8TF44	421 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	PPP1R1C	Q8WVI7	109 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	WDR89	Q96FK6	387 aa	Predicted RBP	5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	VSIR	Q9H7M9	311 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZFAND3	Q9H8U3	227 aa		5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	LSM4	Q9Y4Z0	139 aa	Known RBP	5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms