RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 TMEM42Q69YG0 159 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 PTRHD1Q6GMV3 140 aaKnown RBP0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 ZNF563Q8TA94 476 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 ROPN1LQ96C74 230 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 IMMP2LQ96T52 175 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 OR8D2Q9GZM6 311 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 VCX3BQ9H321 246 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 LRTM1Q9HBL6 345 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 RSL24D1Q9UHA3 163 aaKnown RBP0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 GUCA1BQ9UMX6 200 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 ANGPT4Q9Y264 503 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
SCAMP1-204ENST00000511551 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 DNAH7Q8WXX0 4024 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 EXPH5Q8NEV8 1989 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 SCN8AQ9UQD0 1980 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 OR51F1A6NGY5 319 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 SIGLEC16A6NMB1 481 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 H7C2G1 150 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 LEPROTO15243 131 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 CIAO1O76071 339 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 SERPINA7P05543 415 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 FGF6P10767 208 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 COX6B1P14854 86 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 EVX1P49640 407 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 TMEM258P61165 79 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 POLR2GP62487 172 aaKnown RBP eCLIP0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 RPL30P62888 115 aaKnown RBP0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 FABP9Q0Z7S8 132 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 HIST3H3Q16695 136 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 GUK1Q16774 197 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 LELP1Q5T871 98 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 FAM27BQ5VT28 67 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 FKBP1CQ5VVH2 108 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 SYPL2Q5VXT5 272 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 HIST2H3AQ71DI3 136 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 KTN1-AS1Q86SY8 53 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 OR8J2Q8NGG1 315 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 SLC35B4Q969S0 331 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 CHST6Q9GZX3 395 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 MYCBP2O75592 4640 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 FOCADQ5VW36 1801 aa0.8□□□□□ -2.28
SCAMP1-204ENST00000511551 A0A0D9SEW6 157 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 A0A0J9YY10 115 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 A0A1B0GV50 99 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 TMEM269A0A1B0GVZ9 245 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 A0A1B0GX78 115 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 HMSDA8MTL9 139 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 H3BT86 120 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 PIN1P1O15428 100 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 C1QAP02745 245 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 CLPSP04118 112 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 SRP19P09132 144 aaKnown RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 TFPTP0C1Z6 253 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 ZNF705DP0CH99 300 aaPredicted RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 ZNF705BP0CI00 300 aaPredicted RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 DEFA4P12838 97 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 GPX2P18283 190 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 CCR2P41597 374 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 RAB13P51153 203 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 HIST1H4AP62805 103 aaKnown RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 SLC38A11Q08AI6 406 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 PMAIP1Q13794 54 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 Q6ZS49 121 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 COA5Q86WW8 74 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 LRRC28Q86X40 367 aaPredicted RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 RPP25LQ8N5L8 163 aaKnown RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 ANKRD7Q92527 254 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 SLC7A6Q92536 515 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 CNBD2Q96M20 576 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 ERMAPQ96PL5 475 aaPredicted RBP0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 FUT9Q9Y231 359 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 TIMM22Q9Y584 194 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 LRP2P98164 4655 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 EML6Q6ZMW3 1958 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 DNAH9Q9NYC9 4486 aa0.79□□□□□ -2.28
SCAMP1-204ENST00000511551 FAT2Q9NYQ8 4349 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 KIF20BQ96Q89 1820 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 ANK1P16157 1881 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 NEBP20929 6669 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 TRAV38-1A0A0B4J264 116 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 EEF1E1-BLOC1S5C9J1V9 151 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 C19orf84I3L1E1 186 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 I3L521 148 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 KCNK1O00180 336 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 ZNF737O75373 536 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 IGHV3-7P01780 117 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 PPBPP02775 128 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 HLA-DMBP28068 263 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 HAAOP46952 286 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 CSN1S1P47710 185 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 AQP4P55087 323 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 TCL1AP56279 114 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 OR4D2P58180 307 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 GLT8D1Q68CQ7 371 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 TBC1D19Q8N5T2 526 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 C9orf163Q8N9P6 203 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 OR8B12Q8NGG6 310 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 OR2T4Q8NH00 348 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms