RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 SPIN2BQ9BPZ2 258 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 RNF126Q9BV68 326 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 OR51M1Q9H341 326 aa3.43□□□□□ -1.86
PTPN13-208ENST00000511105 STARD9Q9P2P6 4700 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 IGLV11-55A0A075B6I3 123 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 A0A0A6YYH2 397 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 LINC00854A0A1B0GVQ3 168 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 IGLC7A0M8Q6 106 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 RBMY1BA6NDE4 496 aaKnown RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 RBMY1EA6NEQ0 496 aaKnown RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 A6NJ64 397 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 C2orf70A6NJV1 201 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 H3BUA1 57 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 GGCTO75223 188 aaKnown RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF253O75346 499 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 SNAPC5O75971 98 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 BRI3O95415 125 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 RAB3DO95716 219 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 IGKV1-5P01602 117 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 APOA1P02647 267 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 RBMY1DP0C7P1 496 aaKnown RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 PRB4P10163 310 aaPredicted RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 ZP3P21754 424 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 CBLN1P23435 193 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 F2RP25116 425 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 INSL3P51460 131 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 PIGPP57054 158 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 TAS2R31P59538 309 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 PLET1Q6UQ28 207 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 APRG1Q8IVJ8 170 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 SGPP2Q8IWX5 399 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 OR5B3Q8NH48 314 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 MRGPRFQ96AM1 343 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 EEF1AKMT3Q96AZ1 226 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 TP53RKQ96S44 253 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 ATP5SQ99766 215 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 MRPS26Q9BYN8 205 aaKnown RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 C6orf62Q9GZU0 229 aaPredicted RBP3.42□□□□□ -1.86
PTPN13-208ENST00000511105 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 BET1LQ9NYM9 111 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 HYDINQ4G0P3 5121 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 TNCP24821 2201 aa3.42□□□□□ -1.86
PTPN13-208ENST00000511105 TRAV9-2A0A087WT02 112 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 C3orf85A0A1B0GTC6 90 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 A0A1W2PPV4 95 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 FAM223BA6NKX1 122 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 OR11H12B2RN74 326 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 H0Y980 276 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 TEX46H3BTG2 121 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 MT-CO2P00403 227 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 IFNA17P01571 189 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 RBMY1CP0DJD4 496 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 AKR1C4P17516 323 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 RCVRNP35243 200 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 MAS1LP35410 378 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 BCAP31P51572 246 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 TAS2R46P59540 309 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 RNASE10Q5GAN6 216 aaKnown RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ZC2HC1BQ5TFG8 222 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ACOT7LQ6ZUV0 252 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 SLC25A42Q86VD7 318 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 FAM223AQ8IWN6 122 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 CMTM1Q8IZ96 169 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 OR1S2Q8NGQ3 325 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 OR1L8Q8NGR8 309 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 OR13C8Q8NGS7 320 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 RNASE11Q8TAA1 199 aaKnown RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 LHFPL5Q8TAF8 219 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 GPR146Q96CH1 333 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 RTBDNQ9BSG5 229 aaPredicted RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 NDUFA4L2Q9NRX3 87 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 COPZ2Q9P299 210 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ZMAT5Q9UDW3 170 aaKnown RBP3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ANAPC10Q9UM13 185 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 ZNF257Q9Y2Q1 563 aa3.41□□□□□ -1.86
PTPN13-208ENST00000511105 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM213A2RRL7 107 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 K7EIM0 57 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TGOLN2O43493 480 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 DUSP14O95147 198 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 GABARAPO95166 117 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 IGKV3-20P01619 116 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 CTSDP07339 412 aaPredicted RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 OR5AC1P0C628 307 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 HIST1H1BP16401 226 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TBPP20226 339 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 HSPE1P61604 102 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TNFRSF9Q07011 255 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 PRR4Q16378 134 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 PYDC2Q56P42 97 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms