RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 A0A0J9YWU9 116 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 A0A1B0GVG6 124 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 COX7A2P2O60397 106 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
DDX41-212ENST00000511040 C4BPBP20851 252 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 FGF7P21781 194 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 S100A7P31151 101 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 PSMB3P49720 205 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 FGL1Q08830 312 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 RAB31Q13636 194 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 GDF5OSQ5U4N7 250 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 C16orf92Q96LL3 132 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 RNF126Q9BV68 326 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 SLC25A31Q9H0C2 315 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 ARV1Q9H2C2 271 aa10.23□□□□□ -0.77
DDX41-212ENST00000511040 SEPSECSQ9HD40 501 aaKnown RBP10.23□□□□□ -0.77
DDX41-212ENST00000511040 MPC2O95563 127 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 IGKV3-20P01619 116 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 SNRPCP09234 159 aaKnown RBP10.22□□□□□ -0.77
DDX41-212ENST00000511040 ATF4P18848 351 aaPredicted RBP10.22□□□□□ -0.77
DDX41-212ENST00000511040 CXCL3P19876 107 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 CLINT1Q14677 625 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 CASC10Q5T4H9 136 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 Q6ZNX1 250 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 GPR82Q96P67 336 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
DDX41-212ENST00000511040 F6UB75 175 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 H3BMM0 161 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 ISLRO14498 428 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 RPL7P18124 248 aaKnown RBP10.21□□□□□ -0.77
DDX41-212ENST00000511040 PRR20EP86478 221 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 PRR20CP86479 221 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 PRR20DP86480 221 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 PRR20BP86481 221 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 PRR20AP86496 221 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 FCN2Q15485 313 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 ATP6V1FQ16864 119 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 PXDC1Q5TGL8 231 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 MORN5Q5VZ52 161 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 C10orf113Q5VZT2 155 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
DDX41-212ENST00000511040 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 OR11H2Q8NH07 326 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 MBD2Q9UBB5 411 aa10.21□□□□□ -0.77
DDX41-212ENST00000511040 TRAV8-2A0A0B4J237 113 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 PRB4P10163 310 aaPredicted RBP10.2□□□□□ -0.78
DDX41-212ENST00000511040 SPP1P10451 314 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 MEOX2P50222 304 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 FXYD7P58549 80 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 OPCMLQ14982 345 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 OR11H7Q8NGC8 314 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 GATAD1Q8WUU5 269 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 RARRES2Q99969 163 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 MED28Q9H204 178 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 SLC39A9Q9NUM3 307 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 RYR3Q15413 4870 aa10.2□□□□□ -0.78
DDX41-212ENST00000511040 KMT2CQ8NEZ4 4911 aaKnown RBP10.19□□□□□ -0.78
DDX41-212ENST00000511040 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 H3BTX0 84 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 DEFB4AO15263 64 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 PET100P0DJ07 73 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 B2MP61769 119 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 SAMD13Q5VXD3 122 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 FOXI2Q6ZQN5 318 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 Q6ZRG5 221 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 S100A7AQ86SG5 101 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 OR4B1Q8NGF8 309 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 SAV1Q9H4B6 383 aaPredicted RBP10.19□□□□□ -0.78
DDX41-212ENST00000511040 DNAJC4Q9NNZ3 241 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
DDX41-212ENST00000511040 ELOA3CA0A087WX78 387 aaPredicted RBP10.18□□□□□ -0.78
DDX41-212ENST00000511040 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
DDX41-212ENST00000511040 RPL29P47914 159 aaKnown RBP10.18□□□□□ -0.78
DDX41-212ENST00000511040 EBLN2Q6P2I7 272 aa10.18□□□□□ -0.78
DDX41-212ENST00000511040 NPCDR1Q9BY65 106 aa10.18□□□□□ -0.78
DDX41-212ENST00000511040 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
DDX41-212ENST00000511040 HSPB11Q9Y547 144 aa10.18□□□□□ -0.78
DDX41-212ENST00000511040 A0A087X0K7 114 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
DDX41-212ENST00000511040 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
DDX41-212ENST00000511040 RPL12P30050 165 aaKnown RBP10.17□□□□□ -0.78
DDX41-212ENST00000511040 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 GCSAMLQ5JQS6 135 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 FAM78BQ5VT40 261 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 ZNF738Q8NE65 137 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 IL17DQ8TAD2 202 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
DDX41-212ENST00000511040 A0A0J9YX75 114 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms