RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HIGD1AQ9Y241 93 aa16.55■□□□□ 0.24
SNF8-209ENST00000510558 A0A0J9YX75 114 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 IGLL5B9A064 214 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 HYPMO75409 117 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 TCTAP57738 103 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 PLP1P60201 277 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 NEU1Q99519 415 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 SEC22CQ9BRL7 303 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 SHANK2-AS3Q9BTD1 123 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 SLC35B3Q9H1N7 401 aa16.54■□□□□ 0.24
SNF8-209ENST00000510558 TRAV10A0A0B4J240 114 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 C7orf66A4D0T2 115 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 ZNF705FA8MVS1 300 aaPredicted RBP16.53■□□□□ 0.24
SNF8-209ENST00000510558 ZNF705DP0CH99 300 aaPredicted RBP16.53■□□□□ 0.24
SNF8-209ENST00000510558 ZNF705BP0CI00 300 aaPredicted RBP16.53■□□□□ 0.24
SNF8-209ENST00000510558 PSG9Q00887 426 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 ARL16Q0P5N6 197 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 ZNF846Q147U1 533 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 TEPPQ6URK8 271 aa16.53■□□□□ 0.24
SNF8-209ENST00000510558 ZNF431Q8TF32 576 aaPredicted RBP16.53■□□□□ 0.24
SNF8-209ENST00000510558 IGHV3OR16-12A0A075B7B8 117 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 FAM25EA8MYX2 175 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 K7EPK0 472 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 OR5G3P0C626 314 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 SLC38A11Q08AI6 406 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 RPP25LQ8N5L8 163 aaKnown RBP16.52■□□□□ 0.24
SNF8-209ENST00000510558 UHRF2Q96PU4 802 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 APLNQ9ULZ1 77 aa16.52■□□□□ 0.24
SNF8-209ENST00000510558 DEDDO75618 318 aa16.51■□□□□ 0.23
SNF8-209ENST00000510558 RPL7P18124 248 aaKnown RBP16.51■□□□□ 0.23
SNF8-209ENST00000510558 FGL1Q08830 312 aa16.51■□□□□ 0.23
SNF8-209ENST00000510558 C12orf74Q32Q52 190 aa16.51■□□□□ 0.23
SNF8-209ENST00000510558 ARL6Q9H0F7 186 aa16.51■□□□□ 0.23
SNF8-209ENST00000510558 BIRC6Q9NR09 4857 aa16.51■□□□□ 0.23
SNF8-209ENST00000510558 SMIM9A6NGZ8 99 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 A8MTW9 85 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 L7N2F9 121 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 VAMP2P63027 116 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 ZNF767PQ75MW2 155 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 GGACTQ9BVM4 153 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 LSM5Q9Y4Y9 91 aaKnown RBP16.5■□□□□ 0.23
SNF8-209ENST00000510558 KMT2AQ03164 3969 aa16.5■□□□□ 0.23
SNF8-209ENST00000510558 TRAV8-2A0A0B4J237 113 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 C5orf51A6NDU8 294 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 IGFL4Q6B9Z1 124 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 LINC00299Q6ZSB3 139 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 S100A7AQ86SG5 101 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 C12orf45Q8N5I9 185 aaPredicted RBP16.49■□□□□ 0.23
SNF8-209ENST00000510558 RNF182Q8N6D2 247 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 GOLT1BQ9Y3E0 138 aa16.49■□□□□ 0.23
SNF8-209ENST00000510558 FAM240BA0A1B0GVZ2 78 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 TMEM189A5PLL7 270 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 GOSR2O14653 212 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 AMTNQ6UX39 209 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 PATE2Q6UY27 113 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 ZNF546Q86UE3 836 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 C2orf50Q96LR7 162 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 ARV1Q9H2C2 271 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 RFNGQ9Y644 331 aa16.48■□□□□ 0.23
SNF8-209ENST00000510558 AGPAT2O15120 278 aa16.47■□□□□ 0.23
SNF8-209ENST00000510558 PXDC1Q5TGL8 231 aa16.47■□□□□ 0.23
SNF8-209ENST00000510558 C1orf158Q8N1D5 194 aa16.47■□□□□ 0.23
SNF8-209ENST00000510558 S100ZQ8WXG8 99 aa16.47■□□□□ 0.23
SNF8-209ENST00000510558 IGHV4-4A0A075B6R2 117 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 A0A087X0K7 114 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 DEFB131BA0A096LNP1 70 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 DUSP14O95147 198 aaKnown RBP16.46■□□□□ 0.23
SNF8-209ENST00000510558 BCAP31P51572 246 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 CAV2P51636 162 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 CNN1P51911 297 aaKnown RBP16.46■□□□□ 0.23
SNF8-209ENST00000510558 EMP1P54849 157 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 MZT2BQ6NZ67 158 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 ZNF738Q8NE65 137 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 C11orf1Q9H5F2 150 aa16.46■□□□□ 0.23
SNF8-209ENST00000510558 SPART-AS1P0CW21 52 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 PRR20EP86478 221 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 PRR20CP86479 221 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 PRR20DP86480 221 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 PRR20BP86481 221 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 PRR20AP86496 221 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 MGST2Q99735 147 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 RNF126Q9BV68 326 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 RNF24Q9Y225 148 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 VPS13DQ5THJ4 4388 aa16.45■□□□□ 0.22
SNF8-209ENST00000510558 HBE1P02100 147 aa16.44■□□□□ 0.22
SNF8-209ENST00000510558 ASAH1Q13510 395 aa16.44■□□□□ 0.22
SNF8-209ENST00000510558 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
SNF8-209ENST00000510558 IGF2BP2-AS1Q96M15 143 aa16.44■□□□□ 0.22
SNF8-209ENST00000510558 FAM24AA6NFZ4 105 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 MRPS12O15235 138 aaKnown RBP16.43■□□□□ 0.22
SNF8-209ENST00000510558 CST7O76096 145 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 AMBPP02760 352 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 PVALBP20472 110 aaPredicted RBP16.43■□□□□ 0.22
SNF8-209ENST00000510558 S100A10P60903 97 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 LINC00305Q7Z4B0 112 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 LRRC20Q8TCA0 184 aa16.43■□□□□ 0.22
SNF8-209ENST00000510558 M0R2Z0 102 aa16.42■□□□□ 0.22
SNF8-209ENST00000510558 CXCL3P19876 107 aa16.42■□□□□ 0.22
SNF8-209ENST00000510558 SPINK13Q1W4C9 94 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms