RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 H3BRN7 92 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 GALR1P47211 349 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 SOHLH1Q5JUK2 328 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 GPR141Q7Z602 305 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 OR4D5Q8NGN0 318 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 TRIM63Q969Q1 353 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
RAB40C-202ENST00000509637 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
RAB40C-202ENST00000509637 H3BP45 60 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 MRPS12O15235 138 aaKnown RBP11.07□□□□□ -0.64
RAB40C-202ENST00000509637 NUDT3O95989 172 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 TSPOP30536 169 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 MEOX2P50222 304 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 FAM3BP58499 235 aaPredicted RBP11.07□□□□□ -0.64
RAB40C-202ENST00000509637 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 GGNBP1Q5YKI7 109 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 PATE2Q6UY27 113 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 OR1B1Q8NGR6 318 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 SLC45A2Q9UMX9 530 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 TMED3Q9Y3Q3 217 aa11.07□□□□□ -0.64
RAB40C-202ENST00000509637 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 SYNGR2O43760 224 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 FABP1P07148 127 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 SLC25A6P12236 298 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 CXCL3P19876 107 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 RAB11AP62491 216 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 PPP1R1AQ13522 171 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
RAB40C-202ENST00000509637 PARD6GQ9BYG4 376 aaPredicted RBP11.06□□□□□ -0.64
RAB40C-202ENST00000509637 CCDC59Q9P031 241 aaKnown RBP11.06□□□□□ -0.64
RAB40C-202ENST00000509637 BOLA2-SMG1P6H3BVE0 249 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
RAB40C-202ENST00000509637 INSP01308 110 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 HOXB5P09067 269 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
RAB40C-202ENST00000509637 FGL1Q08830 312 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 TMEM128Q5BJH2 165 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 SPANXN5Q5MJ07 72 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 ZBTB8BQ8NAP8 495 aaPredicted RBP11.05□□□□□ -0.64
RAB40C-202ENST00000509637 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 SCGB3A2Q96PL1 93 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 ATG101Q9BSB4 218 aa11.05□□□□□ -0.64
RAB40C-202ENST00000509637 DUXBA0A1W2PPF3 345 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 CBY3A6NI87 242 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 SFT2D2O95562 160 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 SRPXP78539 464 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 CYP2G1PQ6ZSU1 146 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 BPIFCQ8NFQ6 507 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 LINC01587Q99440 93 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 RABL2BQ9UNT1 228 aa11.04□□□□□ -0.64
RAB40C-202ENST00000509637 FABP12A6NFH5 140 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ADAP1O75689 374 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ATP5G1P05496 136 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ANXA3P12429 323 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 HOXA5P20719 270 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ATP5G3P48201 142 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 PLP1P60201 277 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 POLR2GP62487 172 aaKnown RBP eCLIP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ID3Q02535 119 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 HIST1H1AQ02539 215 aaPredicted RBP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 PSG3Q16557 428 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 Q8N1X5 172 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 ZNF738Q8NE65 137 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
RAB40C-202ENST00000509637 V9GYH0 126 aa11.03□□□□□ -0.64
RAB40C-202ENST00000509637 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 HTN1P15515 57 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 VAMP1P23763 118 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 MORN5Q5VZ52 161 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 Q9H8V8 135 aa11.02□□□□□ -0.65
RAB40C-202ENST00000509637 RABL2AQ9UBK7 228 aaPredicted RBP11.02□□□□□ -0.65
RAB40C-202ENST00000509637 A0A087X0K7 114 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 NOL3O60936 208 aaKnown RBP11.01□□□□□ -0.65
RAB40C-202ENST00000509637 MED6O75586 246 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 TAS2R60P59551 318 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 ARL16Q0P5N6 197 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 ESRGQ1W209 222 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 GPR82Q96P67 336 aa11.01□□□□□ -0.65
RAB40C-202ENST00000509637 H3BMQ9 156 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 H3BTX0 84 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 IL5P05113 134 aa11□□□□□ -0.65
RAB40C-202ENST00000509637 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■□□ 19.1
RAB40C-202ENST00000509637 B2MP61769 119 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms