RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GPR82Q96P67 336 aa10.99□□□□□ -0.65
TPM3-219ENST00000509409 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 ADAP1O75689 374 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
TPM3-219ENST00000509409 UBE2MP61081 183 aaKnown RBP10.98□□□□□ -0.65
TPM3-219ENST00000509409 POLR2GP62487 172 aaKnown RBP eCLIP10.98□□□□□ -0.65
TPM3-219ENST00000509409 IGFL4Q6B9Z1 124 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 CYP2G1PQ6ZSU1 146 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 ACOT7LQ6ZUV0 252 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 TMEM144Q7Z5S9 345 aa10.98□□□□□ -0.65
TPM3-219ENST00000509409 LINC00854A0A1B0GVQ3 168 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 RAP2BP61225 183 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 ID3Q02535 119 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 TRIQKQ629K1 86 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 FAM210BQ96KR6 192 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
TPM3-219ENST00000509409 YTHDF2Q9Y5A9 579 aaKnown RBP10.97□□□□□ -0.65
TPM3-219ENST00000509409 HERC2O95714 4834 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 SSSCA1O60232 199 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 HYPMO75409 117 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 DAD1P61803 113 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 RRAS2P62070 204 aaPredicted RBP10.96□□□□□ -0.65
TPM3-219ENST00000509409 LRRC20Q8TCA0 184 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 C17orf77Q96MU5 243 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 SLC25A39Q9BZJ4 359 aaPredicted RBP10.96□□□□□ -0.65
TPM3-219ENST00000509409 FLVCR2Q9UPI3 526 aa10.96□□□□□ -0.65
TPM3-219ENST00000509409 NDUFB6O95139 128 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 SCGB1D2O95969 90 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 OR5G3P0C626 314 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
TPM3-219ENST00000509409 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 ZNF738Q8NE65 137 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 OR11H7Q8NGC8 314 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 SRRQ9GZT4 340 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
TPM3-219ENST00000509409 CENPXA8MT69 81 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 ZNF705GA8MUZ8 300 aaPredicted RBP10.94□□□□□ -0.66
TPM3-219ENST00000509409 H3BRN7 92 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 M0R2Z0 102 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 INSP01308 110 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 OR4E1P0C645 316 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 LINC00869P0C866 280 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
TPM3-219ENST00000509409 SELENOTP62341 195 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 RHOBP62745 196 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 OXA1LQ15070 435 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 BAK1Q16611 211 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 SHANK2-AS3Q9BTD1 123 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 NPVFQ9HCQ7 196 aa10.94□□□□□ -0.66
TPM3-219ENST00000509409 IGLV2-18A0A075B6J9 118 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 A8MTW9 85 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 PRM2P04554 102 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 METTL15P1P0C7V9 234 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 ANXA7P20073 488 aaKnown RBP10.93□□□□□ -0.66
TPM3-219ENST00000509409 OR10P1Q8NGE3 313 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 KRTAP17-1Q9BYP8 105 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 ARL6Q9H0F7 186 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 GSKIPQ9P0R6 139 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 MGAT4CQ9UBM8 478 aa10.93□□□□□ -0.66
TPM3-219ENST00000509409 DNAH17Q9UFH2 4485 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 CCNKO75909 580 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 B2MP61769 119 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 DLK1P80370 383 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
TPM3-219ENST00000509409 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
TPM3-219ENST00000509409 LGALS9BQ3B8N2 356 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 TMEM88Q6PEY1 159 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 UHRF2Q96PU4 802 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 LINC01587Q99440 93 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
TPM3-219ENST00000509409 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
TPM3-219ENST00000509409 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
TPM3-219ENST00000509409 PLP1P60201 277 aa10.91□□□□□ -0.66
TPM3-219ENST00000509409 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
TPM3-219ENST00000509409 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
TPM3-219ENST00000509409 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 GOSR2O14653 212 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 RTL8CO15255 209 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 CRXO43186 299 aaPredicted RBP10.9□□□□□ -0.66
TPM3-219ENST00000509409 DEFB130BP0DP73 79 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 DEFB130AP0DP74 79 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
TPM3-219ENST00000509409 HTN1P15515 57 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 PSG3Q16557 428 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 RNF212Q495C1 297 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 TMEM14EPQ6UXP3 125 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
TPM3-219ENST00000509409 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
TPM3-219ENST00000509409 RBM38Q9H0Z9 239 aaKnown RBP10.9□□□□□ -0.66
TPM3-219ENST00000509409 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms