RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 LINC00476Q8WZB0 136 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 SLC25A39Q9BZJ4 359 aaPredicted RBP13.55□□□□□ -0.24
UBE3D-207ENST00000509102 HRH4Q9H3N8 390 aa13.55□□□□□ -0.24
UBE3D-207ENST00000509102 LYSTQ99698 3801 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 CCNKO75909 580 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 ASAH1Q13510 395 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 RAB31Q13636 194 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 CSNK1G2-AS1Q8NCQ2 148 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 C2orf50Q96LR7 162 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 SHANK2-AS3Q9BTD1 123 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
UBE3D-207ENST00000509102 GPN1Q9HCN4 374 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-207ENST00000509102 H3BRN7 92 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 K7EPK0 472 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 DEDDO75618 318 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 PLP1P60201 277 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 FGL1Q08830 312 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 GDF5OSQ5U4N7 250 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 ARL6Q9H0F7 186 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 X6R8D5 127 aa13.53□□□□□ -0.24
UBE3D-207ENST00000509102 S100A10P60903 97 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 PSG9Q00887 426 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 LRRC20Q8TCA0 184 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 C2CD4CQ8TF44 421 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
UBE3D-207ENST00000509102 UPK1BO75841 260 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
UBE3D-207ENST00000509102 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 TCTAP57738 103 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 RBMY1FQ15415 496 aaKnown RBP13.51□□□□□ -0.25
UBE3D-207ENST00000509102 FAM78BQ5VT40 261 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 GOLT1BQ9Y3E0 138 aa13.51□□□□□ -0.25
UBE3D-207ENST00000509102 A0A0J9YX75 114 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 AGPAT2O15120 278 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 DUSP14O95147 198 aaKnown RBP13.5□□□□□ -0.25
UBE3D-207ENST00000509102 FXYD7P58549 80 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 DEFB1P60022 68 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 HBG1P69891 147 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 HBG2P69892 147 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 STX12Q86Y82 276 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
UBE3D-207ENST00000509102 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 TMEM189A5PLL7 270 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 A6NHS1 94 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 F6UB75 175 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 COX7A2P2O60397 106 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 HLA-DMBP28068 263 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 Q6ZRG5 221 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 NEU1Q99519 415 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 UQCC1Q9NVA1 299 aa13.49□□□□□ -0.25
UBE3D-207ENST00000509102 ELOA3CA0A087WX78 387 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-207ENST00000509102 TRAV10A0A0B4J240 114 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 CST7O76096 145 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 S100A11P31949 105 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 CAMLGP49069 296 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-207ENST00000509102 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF738Q8NE65 137 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 C20orf173Q96LM9 149 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 LYRM2Q9NU23 88 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-207ENST00000509102 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
UBE3D-207ENST00000509102 PRAF2O60831 178 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 AMBPP02760 352 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 SULT1A1P50225 295 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 DEFA1P59665 94 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 DEFA3P59666 94 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 RAB32Q13637 225 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF709Q8N972 641 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 ALMS1Q8TCU4 4167 aa13.47□□□□□ -0.25
UBE3D-207ENST00000509102 PLECQ15149 4684 aaKnown RBP13.46□□□□□ -0.25
UBE3D-207ENST00000509102 A0A087X0K7 114 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 FAM24AA6NFZ4 105 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-207ENST00000509102 IGLL5B9A064 214 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 RLN2P04090 185 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-207ENST00000509102 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-207ENST00000509102 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 BPIFA4PQ86YQ2 179 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 MGST2Q99735 147 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 PPP1R14DQ9NXH3 145 aa13.46□□□□□ -0.25
UBE3D-207ENST00000509102 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 HBE1P02100 147 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 CXCL2P19875 107 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 CNN1P51911 297 aaKnown RBP13.45□□□□□ -0.26
UBE3D-207ENST00000509102 BAXQ07812 192 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 ATP6V1FQ16864 119 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 LGALS9CQ6DKI2 356 aa13.45□□□□□ -0.26
UBE3D-207ENST00000509102 LCN15Q6UWW0 184 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms