RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PXMP4Q9Y6I8 212 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
NUP54-207ENST00000508583 FXYD6-FXYD2A0A087WZ82 144 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 K7EQG2 157 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 PSMB3P49720 205 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 APOC4P55056 127 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 MIC13Q5XKP0 118 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 TMEM182Q6ZP80 229 aaPredicted RBP6.82□□□□□ -1.32
NUP54-207ENST00000508583 LINC00305Q7Z4B0 112 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 BPIFA4PQ86YQ2 179 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 DEFB125Q8N687 156 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 DCANP1Q8TF63 244 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
NUP54-207ENST00000508583 LOC102724200A0A096LPH7 203 aaPredicted RBP6.81□□□□□ -1.32
NUP54-207ENST00000508583 BORCS7-ASMTA0A0B4J1R7 106 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 UBE2CO00762 179 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 ISLRO14498 428 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 CXCL2P19875 107 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 ODF3L2Q3SX64 289 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 STHQ8IWL8 128 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 SMIM3Q9BZL3 60 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 SLC25A32Q9H2D1 315 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 MAP6D1Q9H9H5 199 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 UBQLN2Q9UHD9 624 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 TGP01266 2768 aa6.81□□□□□ -1.32
NUP54-207ENST00000508583 TAAR5O14804 337 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 ZNF688P0C7X2 276 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 DEFB131AP59861 70 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 GUK1Q16774 197 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 TMEM41BQ5BJD5 291 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 SPATA31B1PQ5VZV4 182 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 LRRC20Q8TCA0 184 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 C16orf92Q96LL3 132 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 RSG1Q9BU20 258 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 MRPL32Q9BYC8 188 aaKnown RBP6.8□□□□□ -1.32
NUP54-207ENST00000508583 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 TIMM9Q9Y5J7 89 aa6.8□□□□□ -1.32
NUP54-207ENST00000508583 A0A087X0K7 114 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 MBP02144 154 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 TAS2R45P59539 299 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 NUTF2P61970 127 aaKnown RBP6.79□□□□□ -1.32
NUP54-207ENST00000508583 ZNF345Q14585 488 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 ACOT6Q3I5F7 207 aaPredicted RBP6.79□□□□□ -1.32
NUP54-207ENST00000508583 PSMG4Q5JS54 123 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 LEMD1Q68G75 181 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 LCN15Q6UWW0 184 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 TMEM37Q8WXS4 190 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 GNPNAT1Q96EK6 184 aaPredicted RBP6.79□□□□□ -1.32
NUP54-207ENST00000508583 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 WFDC10AQ9H1F0 79 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 RPRMQ9NS64 109 aa6.79□□□□□ -1.32
NUP54-207ENST00000508583 RNF222A6NCQ9 220 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 RBMY1BA6NDE4 496 aaKnown RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 RBMY1EA6NEQ0 496 aaKnown RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 HMSDA8MTL9 139 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 ARPC5O15511 151 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 JTBO76095 146 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 RBMY1DP0C7P1 496 aaKnown RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 SPP1P10451 314 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 RHOBP62745 196 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 HAGHQ16775 308 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 FFAR4Q5NUL3 377 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 LINC00322Q6ZN03 302 aaPredicted RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 Q6ZNX1 250 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 SBSPONQ8IVN8 264 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 LINC00052Q96N35 136 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 PSMG3Q9BT73 122 aaPredicted RBP6.78□□□□□ -1.32
NUP54-207ENST00000508583 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 MFFQ9GZY8 342 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 HRH4Q9H3N8 390 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 TMEM14CQ9P0S9 112 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
NUP54-207ENST00000508583 A0A0D9SG52 128 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 SOCS3O14543 225 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 ZNF253O75346 499 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 M6PRP20645 277 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 EIF5AP63241 154 aaKnown RBP6.77□□□□□ -1.33
NUP54-207ENST00000508583 SERF2P84101 59 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 PDE6HQ13956 83 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 Q5BKY6 102 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 EBLN2Q6P2I7 272 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 FOXI2Q6ZQN5 318 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 Q6ZWC4 215 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 ASCL2Q99929 193 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 C1QTNF4Q9BXJ3 329 aa6.77□□□□□ -1.33
NUP54-207ENST00000508583 CSTL1Q9H114 145 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms