RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RBX1P62877 108 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF818PQ6ZRF7 136 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 GOLT1AQ6ZVE7 132 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM190Q8WZ59 177 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 AQP3Q92482 292 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 USMG5Q96IX5 58 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV24A0A0B4J272 114 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM223BA6NKX1 122 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SFT2D2O95562 160 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 LY6G6CO95867 125 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 CA2P00918 260 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 RCC1P18754 421 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 PRTN3P24158 256 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 UBE2BP63146 152 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 RPL24P83731 157 aaKnown RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SURF2Q15527 256 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-208ENST00000508342 MUC21Q5SSG8 566 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 RNF144BQ7Z419 303 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FAM223AQ8IWN6 122 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 SAXO1Q8IYX7 474 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 C20orf144Q9BQM9 153 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 KCNE5Q9UJ90 142 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 ANAPC10Q9UM13 185 aa2.41□□□□□ -2.02
NEDD4-208ENST00000508342 FLNBO75369 2602 aaKnown RBP2.4□□□□□ -2.02
NEDD4-208ENST00000508342 KBTBD11-OT1A0A1B0GTJ5 212 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 CDC42EP2O14613 210 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 PTHLHP12272 177 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 GVQW1Q8N7I0 195 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 RCC2Q9P258 522 aaKnown RBP2.4□□□□□ -2.02
NEDD4-208ENST00000508342 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.02
NEDD4-208ENST00000508342 H3BQ15 152 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 PRCDQ00LT1 54 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 CDSNQ15517 529 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 MST1LQ2TV78 715 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 KIAA1644Q3SXP7 199 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 ZFAND6Q6FIF0 208 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.02
NEDD4-208ENST00000508342 ZFP30Q9Y2G7 519 aa2.4□□□□□ -2.02
NEDD4-208ENST00000508342 USP9YO00507 2555 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TCRBV5S2A0A599 114 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 IGHV3-53P01767 116 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 MBPP02686 304 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM71F2Q6NXP2 309 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM144Q7Z5S9 345 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FGFRL1Q8N441 504 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 C4orf3Q8WVX3 66 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 MRPL27Q9P0M9 148 aaKnown RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TCF19Q9Y242 345 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 PIEZO2Q9H5I5 2752 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TRAV21A0A0B4J279 112 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 A0A1B0GX51 115 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 A6NDN8 102 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 C15orf61A6NNL5 157 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 LINC00587B1AMM8 73 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 PAGE4O60829 102 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFA7O95182 113 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 CA1P00915 261 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 IGF2P01344 180 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 IFI27P40305 119 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 RPL15P61313 204 aaKnown RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 COA6Q5JTJ3 125 aaKnown RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 Q6YL49 198 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 C8orf86Q6ZUL3 223 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 VKORC1L1Q8N0U8 176 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 SMIM4Q8WVI0 70 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 SLC50A1Q9BRV3 221 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 MTFP1Q9UDX5 166 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 KLHDC2Q9Y2U9 406 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 CTXND1A0A1B0GTU2 59 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A10PA6NDY2 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A20PA6NIJ5 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A8PA6NJQ4 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A7PA6NKC0 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A22PA8MWA6 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A12PA8MX19 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A23PA8MXZ1 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 M0R143 59 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A13PP0C7W8 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 FAM90A24PP0C7X0 464 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 SYNJ2BPP57105 145 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TFF3Q07654 80 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE2BQ13066 116 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE2EQ4V326 116 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE2AQ6NT46 116 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TEX45Q8NA69 505 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 TP53RKQ96S44 253 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 IMMP2LQ96T52 175 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 MBNL3Q9NUK0 354 aaKnown RBP2.4□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE2DQ9UEU5 116 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 VAX2Q9UIW0 290 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 SMAD5-AS1Q9Y6J3 95 aa2.4□□□□□ -2.03
NEDD4-208ENST00000508342 SIGLEC5O15389 551 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 APCSP02743 223 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 CFPP27918 469 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SRIP30626 198 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 LINC00158P58513 81 aa2.39□□□□□ -2.03
NEDD4-208ENST00000508342 RPS11P62280 158 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEDD4-208ENST00000508342 SS18Q15532 418 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms