RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PLP1P60201 277 aa11.48□□□□□ -0.57
COL1A1-211ENST00000507689 BAXQ07812 192 aa11.48□□□□□ -0.57
COL1A1-211ENST00000507689 LRRC37A5PQ49AS3 106 aa11.48□□□□□ -0.57
COL1A1-211ENST00000507689 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-211ENST00000507689 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
COL1A1-211ENST00000507689 UBE2L5PA0A1B0GUS4 154 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 H3BRN7 92 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 SIX6O95475 246 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 SCRT1Q9BWW7 348 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 ARV1Q9H2C2 271 aa11.47□□□□□ -0.57
COL1A1-211ENST00000507689 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
COL1A1-211ENST00000507689 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.57
COL1A1-211ENST00000507689 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
COL1A1-211ENST00000507689 PFDN5Q99471 154 aa11.46□□□□□ -0.57
COL1A1-211ENST00000507689 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
COL1A1-211ENST00000507689 NBEAL2Q6ZNJ1 2754 aa11.46□□□□□ -0.58
COL1A1-211ENST00000507689 H3BMM0 161 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 MPDU1O75352 247 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 PTTG1O95997 202 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 IL15RAQ13261 267 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 LINC00305Q7Z4B0 112 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 ZNF709Q8N972 641 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 UHRF2Q96PU4 802 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 MGST2Q99735 147 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 MFFQ9GZY8 342 aa11.45□□□□□ -0.58
COL1A1-211ENST00000507689 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-211ENST00000507689 IGSF23A1L1A6 192 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 JTBO76095 146 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 FGF7P21781 194 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 C11orf1Q9H5F2 150 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 DNAJC4Q9NNZ3 241 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 KCNIP2Q9NS61 270 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
COL1A1-211ENST00000507689 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 SOCS3O14543 225 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 DUSP14O95147 198 aaKnown RBP11.43□□□□□ -0.58
COL1A1-211ENST00000507689 MIFP14174 115 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 B2MP61769 119 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 ZNF738Q8NE65 137 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 PPP1R1CQ8WVI7 109 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
COL1A1-211ENST00000507689 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
COL1A1-211ENST00000507689 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-211ENST00000507689 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
COL1A1-211ENST00000507689 PSG9Q00887 426 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 EWSR1Q01844 656 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL1A1-211ENST00000507689 VWC2Q2TAL6 325 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 OR5C1Q8NGR4 320 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 CLEC5AQ9NY25 188 aa11.42□□□□□ -0.58
COL1A1-211ENST00000507689 C17orf112F2Z3M2 114 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 CXCL2P19875 107 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 C4BPBP20851 252 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 H2BFSP57053 126 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 LCN15Q6UWW0 184 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 SLC50A1Q9BRV3 221 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 OR5AC2Q9NZP5 309 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
COL1A1-211ENST00000507689 A0A087X0K7 114 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 A0A0J9YX75 114 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 NHLH2Q02577 135 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 CLINT1Q14677 625 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 THAP6Q8TBB0 222 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 MED28Q9H204 178 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
COL1A1-211ENST00000507689 MPC2O95563 127 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 IFNA5P01569 189 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 AMBPP02760 352 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 PRR20EP86478 221 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 PRR20CP86479 221 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 PRR20DP86480 221 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 PRR20BP86481 221 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 PRR20AP86496 221 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 OPCMLQ14982 345 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 GUK1Q16774 197 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 SCGB1C1Q8TD33 95 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 CHAC2Q8WUX2 184 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 NPCDR1Q9BY65 106 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 ALG5Q9Y673 324 aa11.39□□□□□ -0.59
COL1A1-211ENST00000507689 HUWE1Q7Z6Z7 4374 aaKnown RBP11.39□□□□□ -0.59
COL1A1-211ENST00000507689 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
COL1A1-211ENST00000507689 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-211ENST00000507689 F6UB75 175 aa11.38□□□□□ -0.59
COL1A1-211ENST00000507689 DEFB4AO15263 64 aa11.38□□□□□ -0.59
COL1A1-211ENST00000507689 GIG44P09565 113 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms