RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 ASB13Q8WXK3 278 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 PFDN5Q99471 154 aa12.3□□□□□ -0.44
SNCA-209ENST00000506244 SPRY2O43597 315 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
SNCA-209ENST00000506244 NHLH2Q02577 135 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 OPCMLQ14982 345 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 ACTL10Q5JWF8 245 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 MORN3Q6PF18 240 aaPredicted RBP12.29□□□□□ -0.44
SNCA-209ENST00000506244 TRPT1Q86TN4 253 aaKnown RBP12.29□□□□□ -0.44
SNCA-209ENST00000506244 CHAC2Q8WUX2 184 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 MBD2Q9UBB5 411 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 TENM3Q9P273 2699 aa12.29□□□□□ -0.44
SNCA-209ENST00000506244 SOCS3O14543 225 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 CA1P00915 261 aaPredicted RBP12.28□□□□□ -0.44
SNCA-209ENST00000506244 B2MP61769 119 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 PRR20EP86478 221 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 PRR20CP86479 221 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 PRR20DP86480 221 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 PRR20BP86481 221 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 PRR20AP86496 221 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 CLINT1Q14677 625 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 C10orf113Q5VZT2 155 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 THAP6Q8TBB0 222 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 RNF183Q96D59 192 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 RSG1Q9BU20 258 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 EDA2RQ9HAV5 297 aa12.28□□□□□ -0.44
SNCA-209ENST00000506244 KNCNA6PVL3 124 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 C3orf84H3BNL1 204 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 CXCL3P19876 107 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
SNCA-209ENST00000506244 FGL1Q08830 312 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 MIC13Q5XKP0 118 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 FOXI2Q6ZQN5 318 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 MUC7Q8TAX7 377 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 LINC00052Q96N35 136 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 ATP5SQ99766 215 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 RPRMQ9NS64 109 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 PXMP4Q9Y6I8 212 aa12.27□□□□□ -0.45
SNCA-209ENST00000506244 A0A087X0K7 114 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 GIPP09681 153 aaPredicted RBP12.26□□□□□ -0.45
SNCA-209ENST00000506244 HLA-DRB4P13762 266 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
SNCA-209ENST00000506244 OXA1LQ15070 435 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 FCN2Q15485 313 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 ZNF709Q8N972 641 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 HLA-DRB4X5D2U9 266 aa12.26□□□□□ -0.45
SNCA-209ENST00000506244 C17orf112F2Z3M2 114 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 LYL1P12980 280 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 CXCL2P19875 107 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 EBLN2Q6P2I7 272 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 IL17DQ8TAD2 202 aa12.25□□□□□ -0.45
SNCA-209ENST00000506244 LCN15Q6UWW0 184 aa12.24□□□□□ -0.45
SNCA-209ENST00000506244 LRRC20Q8TCA0 184 aa12.24□□□□□ -0.45
SNCA-209ENST00000506244 TMEM37Q8WXS4 190 aa12.24□□□□□ -0.45
SNCA-209ENST00000506244 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
SNCA-209ENST00000506244 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
SNCA-209ENST00000506244 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
SNCA-209ENST00000506244 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
SNCA-209ENST00000506244 H3BMM0 161 aa12.23□□□□□ -0.45
SNCA-209ENST00000506244 IFNA5P01569 189 aa12.23□□□□□ -0.45
SNCA-209ENST00000506244 DNAH7Q8WXX0 4024 aa12.23□□□□□ -0.45
SNCA-209ENST00000506244 SCGB1C1Q8TD33 95 aa12.22□□□□□ -0.45
SNCA-209ENST00000506244 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
SNCA-209ENST00000506244 RARRES2Q99969 163 aa12.22□□□□□ -0.45
SNCA-209ENST00000506244 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
SNCA-209ENST00000506244 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.45
SNCA-209ENST00000506244 C4BPBP20851 252 aa12.21□□□□□ -0.45
SNCA-209ENST00000506244 GUK1Q16774 197 aa12.21□□□□□ -0.45
SNCA-209ENST00000506244 PARD6GQ9BYG4 376 aaPredicted RBP12.21□□□□□ -0.45
SNCA-209ENST00000506244 A0A0J9YX75 114 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 ZNF738Q8NE65 137 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 SMIM3Q9BZL3 60 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 CLEC5AQ9NY25 188 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 AGRNO00468 2067 aa12.2□□□□□ -0.46
SNCA-209ENST00000506244 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
SNCA-209ENST00000506244 ZNF266Q14584 549 aa12.19□□□□□ -0.46
SNCA-209ENST00000506244 GDF5OSQ5U4N7 250 aa12.19□□□□□ -0.46
SNCA-209ENST00000506244 MORN5Q5VZ52 161 aa12.19□□□□□ -0.46
SNCA-209ENST00000506244 OR4B1Q8NGF8 309 aa12.19□□□□□ -0.46
SNCA-209ENST00000506244 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
SNCA-209ENST00000506244 AQP10Q96PS8 301 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms