RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MUC7Q8TAX7 377 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 STARD9Q9P2P6 4700 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 MRPS12O15235 138 aaKnown RBP13.05□□□□□ -0.32
SMN1-204ENST00000506163 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
SMN1-204ENST00000506163 HBG1P69891 147 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 HBG2P69892 147 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 FCN2Q15485 313 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 STHQ8IWL8 128 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 KMT2CQ8NEZ4 4911 aaKnown RBP13.04□□□□□ -0.32
SMN1-204ENST00000506163 TRAV8-2A0A0B4J237 113 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 C4BPBP20851 252 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 GALR1P47211 349 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
SMN1-204ENST00000506163 H3BMM0 161 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
SMN1-204ENST00000506163 FGF7P21781 194 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 PSMB3P49720 205 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 BAXQ07812 192 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 OPCMLQ14982 345 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 MBD2Q9UBB5 411 aa13.03□□□□□ -0.32
SMN1-204ENST00000506163 ISLRO14498 428 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.33
SMN1-204ENST00000506163 CLINT1Q14677 625 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 OXA1LQ15070 435 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 GPR82Q96P67 336 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 SLC39A9Q9NUM3 307 aa13.02□□□□□ -0.33
SMN1-204ENST00000506163 F6UB75 175 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 LYL1P12980 280 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 ID1P41134 155 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 RAB31Q13636 194 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 Q5BKY6 102 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 MED28Q9H204 178 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
SMN1-204ENST00000506163 TRAV5A0A0B4J249 113 aa13□□□□□ -0.33
SMN1-204ENST00000506163 COX7A2P2O60397 106 aa13□□□□□ -0.33
SMN1-204ENST00000506163 SNRPCP09234 159 aaKnown RBP13□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DRB4P13762 266 aa13□□□□□ -0.33
SMN1-204ENST00000506163 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
SMN1-204ENST00000506163 B2MP61769 119 aa13□□□□□ -0.33
SMN1-204ENST00000506163 RGS21Q2M5E4 152 aa13□□□□□ -0.33
SMN1-204ENST00000506163 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
SMN1-204ENST00000506163 C16orf92Q96LL3 132 aa13□□□□□ -0.33
SMN1-204ENST00000506163 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
SMN1-204ENST00000506163 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
SMN1-204ENST00000506163 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
SMN1-204ENST00000506163 A0A0J9YWU9 116 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 RPL12P30050 165 aaKnown RBP12.99□□□□□ -0.33
SMN1-204ENST00000506163 S100A7P31151 101 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 MEOX2P50222 304 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 FGL1Q08830 312 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 PXMP4Q9Y6I8 212 aa12.99□□□□□ -0.33
SMN1-204ENST00000506163 A0A087X0K7 114 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
SMN1-204ENST00000506163 SPP1P10451 314 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 HLA-DMBP28068 263 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 Q6ZRG5 221 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
SMN1-204ENST00000506163 WDR61Q9GZS3 305 aaKnown RBP12.98□□□□□ -0.33
SMN1-204ENST00000506163 MPDU1O75352 247 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 PET100P0DJ07 73 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
SMN1-204ENST00000506163 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
SMN1-204ENST00000506163 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 RARRES2Q99969 163 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 SMIM3Q9BZL3 60 aa12.97□□□□□ -0.33
SMN1-204ENST00000506163 A0A0J9YX75 114 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 H3BQ15 152 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 H3BTX0 84 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 ATP5SQ99766 215 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 RFNGQ9Y644 331 aa12.96□□□□□ -0.33
SMN1-204ENST00000506163 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.34
SMN1-204ENST00000506163 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.34
SMN1-204ENST00000506163 IGLC2P0DOY2 106 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 FXYD7P58549 80 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 FAM78BQ5VT40 261 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 S100A7AQ86SG5 101 aa12.96□□□□□ -0.34
SMN1-204ENST00000506163 ZNF709Q8N972 641 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms