RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SCGB3A2Q96PL1 93 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 OVOL2Q9BRP0 275 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 PRADC1Q9BSG0 188 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 PBOV1Q9GZY1 135 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 TMEM191AQ9H0A3 160 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 FAM60AQ9NP50 221 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 TRPM6Q9BX84 2022 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 TMED7-TICAM2A0A0A6YYA0 188 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 A0A1W2PQD3 144 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 TRAPPC6AO75865 159 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 NUDT14O95848 222 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 RHOCP08134 193 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 P0C879 139 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 GUCA1AP43080 201 aaPredicted RBP1.77□□□□□ -2.13
NEDD4-205ENST00000506154 KLK9Q2XQG4 91 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 GAGE13Q4V321 117 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 Q6ZSN1 163 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 MRPL55Q7Z7F7 128 aaKnown RBP1.77□□□□□ -2.13
NEDD4-205ENST00000506154 TRPT1Q86TN4 253 aaKnown RBP1.77□□□□□ -2.13
NEDD4-205ENST00000506154 ANAPC13Q9BS18 74 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 C21orf62Q9NYP8 219 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 KCNIP1Q9NZI2 227 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 KLK9Q9UKQ9 250 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 KLF13Q9Y2Y9 288 aaPredicted RBP1.77□□□□□ -2.13
NEDD4-205ENST00000506154 ARL2-SNX15V9GYD0 113 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 CACNA1EQ15878 2313 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 C15orf62A8K5M9 175 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 PMS2P5A8MQ11 134 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 SAP18O00422 153 aaKnown RBP1.77□□□□□ -2.13
NEDD4-205ENST00000506154 ISLRO14498 428 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 CXorf1O96002 111 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 IGLC6P0CF74 106 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 EMDP50402 254 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 GDF5OSQ5U4N7 250 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 PRSS41Q7RTY9 318 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF584Q8IVC4 421 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 NUP35Q8NFH5 326 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 UBE2E3Q969T4 207 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 SPCS1Q9Y6A9 102 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 SDK2Q58EX2 2172 aa1.77□□□□□ -2.13
NEDD4-205ENST00000506154 ASH1LQ9NR48 2969 aaKnown RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 BOD1L1Q8NFC6 3051 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 A0A1W2PS29 197 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF736B4DX44 427 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 HMGB3O15347 200 aaKnown RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CYB5AP00167 134 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CTLA4P16410 223 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 UBE2D1P51668 147 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 APOC4P55056 127 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 TCTAP57738 103 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 TAL2Q16559 108 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 C11orf21Q9P2W6 132 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 FIS1Q9Y3D6 152 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 TRBV7-3A0A075B6L6 115 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 PPYP01298 95 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 IGKV1D-16P01601 117 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 NTSP30990 170 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 GLRXP35754 106 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 RPS21P63220 83 aaKnown RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 LCN10Q6JVE6 187 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 Q6ZPA2 131 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 TEN1Q86WV5 123 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CLECL1Q8IZS7 167 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF439Q8NDP4 499 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 OR1L8Q8NGR8 309 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 SGK494Q96LW2 274 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 RASL11BQ9BPW5 248 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 TXNDC17Q9BRA2 123 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 MAP1LC3AQ9H492 121 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CCL22O00626 93 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNHIT1O43257 154 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 HBE1P02100 147 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 BCL3P20749 454 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 LYSMD4Q5XG99 296 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ANKRD37Q7Z713 158 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 OR4X2Q8NGF9 303 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 DEC1Q9P2X7 70 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 USP24Q9UPU5 2620 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CSMD2Q7Z408 3487 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 C5orf63A6NC05 138 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 FP248Q71RG6 208 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 RAB42Q8N4Z0 105 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZFP62Q8NB50 900 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ADAT3Q96EY9 351 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 PRSS22Q9GZN4 317 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 IL36BQ9NZH7 164 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 A0A087WZ39 114 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 A0A0A6YYD4 124 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 LOC101059948A0A1B0GTJ6 334 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF705FA8MVS1 300 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 H3BP45 60 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 HMGN4O00479 90 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 GYPAP02724 150 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF705DP0CH99 300 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 ZNF705BP0CI00 300 aaPredicted RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 RPL38P63173 70 aaKnown RBP1.76□□□□□ -2.13
NEDD4-205ENST00000506154 OR1C1Q15619 314 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 CRYBG3Q68DQ2 2970 aa1.76□□□□□ -2.13
NEDD4-205ENST00000506154 SLC48A1Q6P1K1 146 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms