RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ZFP92A6NM28 416 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 C17orf112F2Z3M2 114 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 BMPR1BO00238 502 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 SCGB2A1O75556 95 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 TOMM40O96008 361 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 CFDP00746 253 aaPredicted RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 TRBV12-3P01733 135 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 IGHV3-11P01762 117 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 IGHV3-23P01764 117 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 HSPB1P04792 205 aaKnown RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 NPSP0C0P6 89 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 LINC00869P0C866 280 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 TPT1P13693 172 aaKnown RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 ATP6V0CP27449 155 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 GPR183P32249 361 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 ARL3P36405 182 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 FGF8P55075 233 aaPredicted RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 PLP1P60201 277 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 RPL19P84098 196 aaKnown RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 SERF2P84101 59 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 PRR20EP86478 221 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 PRR20CP86479 221 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 PRR20DP86480 221 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 PRR20BP86481 221 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 PRR20AP86496 221 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 RAB31Q13636 194 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 TIGITQ495A1 244 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 CYP2G1PQ6ZSU1 146 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 C18orf65Q6ZTR6 163 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 SSX7Q7RTT5 188 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 NDUFA11Q86Y39 141 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 OR2G3Q8NGZ4 309 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 ORAOV1Q8WV07 137 aa5.54□□□□□ -1.52
NUP54-204ENST00000506098 GNPNAT1Q96EK6 184 aaPredicted RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 ZNF471Q9BX82 626 aaPredicted RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 ACTR3CQ9C0K3 210 aaPredicted RBP5.54□□□□□ -1.52
NUP54-204ENST00000506098 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 C20orf202A1L168 122 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 PPP5D1E7EU14 171 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 NDUFA4O00483 81 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 OR2C1O95371 312 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 SEC11BP0C7V7 166 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 PSG1P11464 419 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 UBE2G2P60604 165 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 ZNF90Q03938 601 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 FHL3Q13643 280 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 TMEM241Q24JQ0 296 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 TMEM182Q6ZP80 229 aaPredicted RBP5.53□□□□□ -1.52
NUP54-204ENST00000506098 GPHB5Q86YW7 130 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 ZNF709Q8N972 641 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 KLHL30-AS1Q8NEE0 82 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 OR51G1Q8NGK1 321 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
NUP54-204ENST00000506098 RSG1Q9BU20 258 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 KCNIP2Q9NS61 270 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 COL6A5A8TX70 2615 aa5.53□□□□□ -1.52
NUP54-204ENST00000506098 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 A0A087WW49 117 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 LINC01619G3V211 115 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 YIF1AO95070 293 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 GCGP01275 180 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 RD3LP0DJH9 198 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 GATA2P23769 480 aaPredicted RBP5.52□□□□□ -1.53
NUP54-204ENST00000506098 ZNF616Q08AN1 781 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 KLF5Q13887 457 aaPredicted RBP5.52□□□□□ -1.53
NUP54-204ENST00000506098 MIC13Q5XKP0 118 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 C8orf86Q6ZUL3 223 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 STPG3Q8N7X2 389 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 C11orf44Q8N8P7 122 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 OR11H1Q8NG94 326 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 OR1N2Q8NGR9 330 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 C2CD4CQ8TF44 421 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 Q8WTZ3 238 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 RAX2Q96IS3 184 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 OR5B12Q96R08 314 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 FAM110AQ9BQ89 295 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 SH3BGRL3Q9H299 93 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 ZFAND3Q9H8U3 227 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 MRPL27Q9P0M9 148 aaKnown RBP5.52□□□□□ -1.53
NUP54-204ENST00000506098 RFNGQ9Y644 331 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 PXMP4Q9Y6I8 212 aa5.52□□□□□ -1.53
NUP54-204ENST00000506098 CMYA5Q8N3K9 4069 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 CXorf65A6NEN9 183 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 K7EMT4 169 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 K7ERU9 68 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 CCL24O00175 119 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 LGALS9O00182 355 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 WIPF1O43516 503 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 TSPAN15O95858 294 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 HOXD3P31249 432 aaPredicted RBP5.51□□□□□ -1.53
NUP54-204ENST00000506098 MYCNOSP40205 109 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 RIPPLY3P57055 190 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 ERVFC1-1P60608 527 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 JOSD1Q15040 202 aaPredicted RBP5.51□□□□□ -1.53
NUP54-204ENST00000506098 RPEL1Q2QD12 228 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 KHDC1LQ5JSQ8 128 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 FFAR4Q5NUL3 377 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms