RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RHOGP84095 191 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 DEFB125Q8N687 156 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 TEX45Q8NA69 505 aa9.44□□□□□ -0.9
UBE3D-206ENST00000505226 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 SNAI2O43623 268 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 LIPFP07098 398 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
UBE3D-206ENST00000505226 CDKN1BP46527 198 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 CRIP1P50238 77 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 WFDC8Q8IUA0 241 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 SLC25A39Q9BZJ4 359 aaPredicted RBP9.43□□□□□ -0.9
UBE3D-206ENST00000505226 TRAV30A0A087WSZ9 112 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 CBY3A6NI87 242 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 FTH1P19P0C7X4 201 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 IGHV1-8P0DP01 117 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 RPL27AP46776 148 aaKnown RBP9.43□□□□□ -0.9
UBE3D-206ENST00000505226 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 RNF24Q9Y225 148 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
UBE3D-206ENST00000505226 NDUFB3O43676 98 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 BSPH1Q075Z2 132 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 TMEM155Q4W5P6 130 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 HIGD1AQ9Y241 93 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 SIGLEC9Q9Y336 463 aa9.43□□□□□ -0.9
UBE3D-206ENST00000505226 ANKRD11Q6UB99 2663 aaPredicted RBP9.42□□□□□ -0.9
UBE3D-206ENST00000505226 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 THBDP07204 575 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 LGALS7P47929 136 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
UBE3D-206ENST00000505226 AMMECR1LQ6DCA0 310 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 PIP4P1Q86T03 277 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
UBE3D-206ENST00000505226 PIEZO2Q9H5I5 2752 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 OTOGLQ3ZCN5 2332 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 MC5RP33032 325 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
UBE3D-206ENST00000505226 HTR1DP28221 377 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 TMEM108Q6UXF1 575 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 F11RQ9Y624 299 aaKnown RBP9.41□□□□□ -0.9
UBE3D-206ENST00000505226 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
UBE3D-206ENST00000505226 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 A0A096LNJ9 63 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 I3L2K1 104 aa9.41□□□□□ -0.9
UBE3D-206ENST00000505226 A0A1B0GUT8 65 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 TMEM133Q9H2Q1 129 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 FBXL15Q9H469 300 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 PSG9Q00887 426 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 IGFBPL1Q8WX77 278 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.9
UBE3D-206ENST00000505226 TPRP12270 2363 aaKnown RBP9.4□□□□□ -0.91
UBE3D-206ENST00000505226 ASH1LQ9NR48 2969 aaKnown RBP9.4□□□□□ -0.91
UBE3D-206ENST00000505226 ZGRF1Q86YA3 2104 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 RBP4P02753 201 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 ARF6P62330 175 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 LDLRAD2Q5SZI1 272 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 Q6ZS92 163 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 Q9UFV3 132 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 TRBV19A0A075B6N1 114 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 M0R3E3 92 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 HLA-DRB1P01911 266 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
UBE3D-206ENST00000505226 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 IGLV1-47P01700 117 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 FXYD7P58549 80 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 C12orf54Q6X4T0 127 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
UBE3D-206ENST00000505226 POLEQ07864 2286 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 GVINP1Q7Z2Y8 2422 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 COX8AP10176 69 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 GPR183P32249 361 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 C16orf97H3BN30 126 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 FGF6P10767 208 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 TCTAP57738 103 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms