RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 LEMD1Q68G75 181 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 ATP5SQ99766 215 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 NPCDR1Q9BY65 106 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 SLC25A22Q9H936 323 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 NRN1Q9NPD7 142 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
SYNE4-207ENST00000505054 MPDU1O75352 247 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
SYNE4-207ENST00000505054 ZNF124Q15973 351 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 APRG1Q8IVJ8 170 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 OR8I2Q8N0Y5 310 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 WDR61Q9GZS3 305 aaKnown RBP12.48□□□□□ -0.41
SYNE4-207ENST00000505054 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 WFDC1Q9HC57 220 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
SYNE4-207ENST00000505054 B2MP61769 119 aa12.47□□□□□ -0.41
SYNE4-207ENST00000505054 C17orf77Q96MU5 243 aa12.47□□□□□ -0.41
SYNE4-207ENST00000505054 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
SYNE4-207ENST00000505054 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
SYNE4-207ENST00000505054 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
SYNE4-207ENST00000505054 COX7A2P2O60397 106 aa12.46□□□□□ -0.41
SYNE4-207ENST00000505054 ZNF688P0C7X2 276 aa12.46□□□□□ -0.41
SYNE4-207ENST00000505054 S100A7P31151 101 aa12.46□□□□□ -0.41
SYNE4-207ENST00000505054 DEFB131AP59861 70 aa12.46□□□□□ -0.41
SYNE4-207ENST00000505054 HAGHQ16775 308 aa12.46□□□□□ -0.41
SYNE4-207ENST00000505054 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 FXYD6-FXYD2A0A087WZ82 144 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 SOCS3O14543 225 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 GALR1P47211 349 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
SYNE4-207ENST00000505054 MORN5Q5VZ52 161 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 Q6ZNX1 250 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 Q6ZRG5 221 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 GPR82Q96P67 336 aa12.45□□□□□ -0.42
SYNE4-207ENST00000505054 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
SYNE4-207ENST00000505054 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 SMLR1H3BR10 107 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 JTBO76095 146 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 C10orf113Q5VZT2 155 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 S100A7AQ86SG5 101 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 RSG1Q9BU20 258 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 DNAJC4Q9NNZ3 241 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
SYNE4-207ENST00000505054 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
SYNE4-207ENST00000505054 IFNA5P01569 189 aa12.43□□□□□ -0.42
SYNE4-207ENST00000505054 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
SYNE4-207ENST00000505054 PSMG4Q5JS54 123 aa12.43□□□□□ -0.42
SYNE4-207ENST00000505054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
SYNE4-207ENST00000505054 OR1L4Q8NGR5 311 aa12.43□□□□□ -0.42
SYNE4-207ENST00000505054 PFDN5Q99471 154 aa12.43□□□□□ -0.42
SYNE4-207ENST00000505054 PARD6GQ9BYG4 376 aaPredicted RBP12.43□□□□□ -0.42
SYNE4-207ENST00000505054 SEPSECSQ9HD40 501 aaKnown RBP12.43□□□□□ -0.42
SYNE4-207ENST00000505054 LOC102724200A0A096LPH7 203 aaPredicted RBP12.42□□□□□ -0.42
SYNE4-207ENST00000505054 ZNF709Q8N972 641 aa12.42□□□□□ -0.42
SYNE4-207ENST00000505054 KCNIP2Q9NS61 270 aa12.42□□□□□ -0.42
SYNE4-207ENST00000505054 TRAV5A0A0B4J249 113 aa12.41□□□□□ -0.42
SYNE4-207ENST00000505054 PSMB3P49720 205 aa12.41□□□□□ -0.42
SYNE4-207ENST00000505054 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
SYNE4-207ENST00000505054 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
SYNE4-207ENST00000505054 SCGB1C1Q8TD33 95 aa12.41□□□□□ -0.42
SYNE4-207ENST00000505054 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
SYNE4-207ENST00000505054 RFNGQ9Y644 331 aa12.41□□□□□ -0.42
SYNE4-207ENST00000505054 A0A087X0K7 114 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 KNCNA6PVL3 124 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 C17orf112F2Z3M2 114 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 ISLRO14498 428 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.42
SYNE4-207ENST00000505054 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
SYNE4-207ENST00000505054 MEOX2P50222 304 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
SYNE4-207ENST00000505054 TRAV8-2A0A0B4J237 113 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 ARPC5O15511 151 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 ID1P41134 155 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 DEFB1P60022 68 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 SPATA31B1PQ5VZV4 182 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 C20orf173Q96LM9 149 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 RETNQ9HD89 108 aa12.39□□□□□ -0.43
SYNE4-207ENST00000505054 ZNF266Q14584 549 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 ACTL10Q5JWF8 245 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 FFAR4Q5NUL3 377 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 TRPT1Q86TN4 253 aaKnown RBP12.38□□□□□ -0.43
SYNE4-207ENST00000505054 BPIFA4PQ86YQ2 179 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 OR11H4Q8NGC9 324 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 LINC00052Q96N35 136 aa12.38□□□□□ -0.43
SYNE4-207ENST00000505054 ALMS1Q8TCU4 4167 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 KIR2DL5BA0A0G2JN68 375 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 KIR2DL5BA0A0G2JPC4 375 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 SNRPCP09234 159 aaKnown RBP12.37□□□□□ -0.43
SYNE4-207ENST00000505054 IGLC2P0DOY2 106 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 APOC4P55056 127 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 FAM78BQ5VT40 261 aa12.37□□□□□ -0.43
SYNE4-207ENST00000505054 IGFL4Q6B9Z1 124 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms