RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LINC00322Q6ZN03 302 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-220ENST00000505005 SLC51BQ86UW2 128 aa7.36□□□□□ -1.23
NR1I3-220ENST00000505005 TMEM217Q8N7C4 229 aa7.36□□□□□ -1.23
NR1I3-220ENST00000505005 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
NR1I3-220ENST00000505005 PHYHIPLQ96FC7 376 aa7.36□□□□□ -1.23
NR1I3-220ENST00000505005 ZNF414Q96IQ9 312 aa7.36□□□□□ -1.23
NR1I3-220ENST00000505005 KANTRA0A1W2PQU2 76 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 ZNF98A6NK75 572 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 K7EQG2 157 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 BCL2L11O43521 198 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 IFNA5P01569 189 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 OR5G3P0C626 314 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 LINC00869P0C866 280 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-220ENST00000505005 CXCL2P19875 107 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
NR1I3-220ENST00000505005 PSMB3P49720 205 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 HAGHQ16775 308 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 ZNF767PQ75MW2 155 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 DEFB125Q8N687 156 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 ARL6Q9H0F7 186 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 CSTL1Q9H114 145 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 WDR83OSQ9Y284 106 aa7.35□□□□□ -1.23
NR1I3-220ENST00000505005 IGKV1OR2-108A0A075B7D4 117 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 IGHV3OR16-13A0A075B7E8 117 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 IGHV3-49A0A0A0MS15 119 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 IGHV3-74A0A0B4J1X5 117 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 FAM24AA6NFZ4 105 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 AGPAT2O15120 278 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 COX7A2P2O60397 106 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 CST7O76096 145 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 TFPI2P48307 235 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 ZNF266Q14584 549 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 OPCMLQ14982 345 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 GUK1Q16774 197 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 EBLN2Q6P2I7 272 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 GBGT1Q8N5D6 347 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 LRRC20Q8TCA0 184 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 SCGB1C1Q8TD33 95 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 DCANP1Q8TF63 244 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 CLUHP3Q96NS8 147 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 RCHY1Q96PM5 261 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-220ENST00000505005 MAP6D1Q9H9H5 199 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 DNAJC4Q9NNZ3 241 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 RPRMQ9NS64 109 aa7.34□□□□□ -1.23
NR1I3-220ENST00000505005 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 JTBO76095 146 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 IFNA7P01567 189 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 APOHP02749 345 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-220ENST00000505005 DEFB131AP59861 70 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 EWSR1Q01844 656 aaKnown RBP eCLIP7.33□□□□□ -1.24
NR1I3-220ENST00000505005 ODF3L2Q3SX64 289 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 C10orf113Q5VZT2 155 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 OR5C1Q8NGR4 320 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 C16orf92Q96LL3 132 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 PARD6GQ9BYG4 376 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-220ENST00000505005 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 DNAH3Q8TD57 4116 aa7.33□□□□□ -1.24
NR1I3-220ENST00000505005 IGHV3-66A0A0C4DH42 116 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 C3orf84H3BNL1 204 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 H3BRN7 92 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
NR1I3-220ENST00000505005 AMBPP02760 352 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 EDN2P20800 178 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 B2MP61769 119 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 EIF5AL1Q6IS14 154 aaKnown RBP7.32□□□□□ -1.24
NR1I3-220ENST00000505005 TEX261Q6UWH6 196 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 LCN15Q6UWW0 184 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 ASCL2Q99929 193 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 SLC50A1Q9BRV3 221 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 SLC25A22Q9H936 323 aa7.32□□□□□ -1.24
NR1I3-220ENST00000505005 A0A087X0K7 114 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 BORCS7-ASMTA0A0B4J1R7 106 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 RBMY1BA6NDE4 496 aaKnown RBP7.31□□□□□ -1.24
NR1I3-220ENST00000505005 RBMY1EA6NEQ0 496 aaKnown RBP7.31□□□□□ -1.24
NR1I3-220ENST00000505005 SPRY2O43597 315 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 RBMY1DP0C7P1 496 aaKnown RBP7.31□□□□□ -1.24
NR1I3-220ENST00000505005 TPT1P13693 172 aaKnown RBP7.31□□□□□ -1.24
NR1I3-220ENST00000505005 FGF7P21781 194 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 IFITM2Q01629 132 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 FOXI2Q6ZQN5 318 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 LINC00305Q7Z4B0 112 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 ATP5SQ99766 215 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
NR1I3-220ENST00000505005 SLC39A9Q9NUM3 307 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 UBQLN2Q9UHD9 624 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 PXMP4Q9Y6I8 212 aa7.31□□□□□ -1.24
NR1I3-220ENST00000505005 UBE2L5PA0A1B0GUS4 154 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 IGSF23A1L1A6 192 aa7.3□□□□□ -1.24
NR1I3-220ENST00000505005 ZNF253O75346 499 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms