RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RYR2Q92736 4967 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 ISLRO14498 428 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 AGPAT2O15120 278 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 SNRPCP09234 159 aaKnown RBP10.35□□□□□ -0.75
HOXC9-202ENST00000504557 MEOX2P50222 304 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 SELENOTP62341 195 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 NRARPQ7Z6K4 114 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 Q8NAQ8 132 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 SHANK2-AS3Q9BTD1 123 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
HOXC9-202ENST00000504557 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 SLC45A2Q9UMX9 530 aa10.35□□□□□ -0.75
HOXC9-202ENST00000504557 LYSTQ99698 3801 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 UBE2L5PA0A1B0GUS4 154 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 LY6G6CO95867 125 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 ZNF705DP0CH99 300 aaPredicted RBP10.34□□□□□ -0.75
HOXC9-202ENST00000504557 ZNF705BP0CI00 300 aaPredicted RBP10.34□□□□□ -0.75
HOXC9-202ENST00000504557 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
HOXC9-202ENST00000504557 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
HOXC9-202ENST00000504557 LRRC37A5PQ49AS3 106 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 FAM78BQ5VT40 261 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 ZNF546Q86UE3 836 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 LRRC20Q8TCA0 184 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 GPR82Q96P67 336 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 MGST2Q99735 147 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 SLC35B3Q9H1N7 401 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 KLK5Q9Y337 293 aaPredicted RBP10.34□□□□□ -0.75
HOXC9-202ENST00000504557 X6R8D5 127 aa10.34□□□□□ -0.75
HOXC9-202ENST00000504557 FNDC10F2Z333 226 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 INMT-MINDY4F8WBC2 141 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 DEDDO75618 318 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 MIFP14174 115 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 BAXQ07812 192 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 PATE2Q6UY27 113 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 ZNF767PQ75MW2 155 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 CSNK1G2-AS1Q8NCQ2 148 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
HOXC9-202ENST00000504557 H3BTX0 84 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
HOXC9-202ENST00000504557 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 CAMLGP49069 296 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 EMP1P54849 157 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 DEFA1P59665 94 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 DEFA3P59666 94 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 PLP1P60201 277 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 SAMD13Q5VXD3 122 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 STX12Q86Y82 276 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 GGACTQ9BVM4 153 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 MFFQ9GZY8 342 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 C11orf1Q9H5F2 150 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
HOXC9-202ENST00000504557 UQCC1Q9NVA1 299 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
HOXC9-202ENST00000504557 ELOA3CA0A087WX78 387 aaPredicted RBP10.31□□□□□ -0.76
HOXC9-202ENST00000504557 A0A0J9YX75 114 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 ZNF705EA8MWA4 302 aaPredicted RBP10.31□□□□□ -0.76
HOXC9-202ENST00000504557 SULT1A1P50225 295 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 PSG9Q00887 426 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 RAB31Q13636 194 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 S100A7AQ86SG5 101 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 TMEM252Q8N6L7 170 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 BATF3Q9NR55 127 aa10.31□□□□□ -0.76
HOXC9-202ENST00000504557 ALMS1Q8TCU4 4167 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 SSNA1O43805 119 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 FGF7P21781 194 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 HBG1P69891 147 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 HBG2P69892 147 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 IL15RAQ13261 267 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 MORN5Q5VZ52 161 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 C10orf113Q5VZT2 155 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 ZNF709Q8N972 641 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 LINC00476Q8WZB0 136 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 CELA1Q9UNI1 258 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 HYDINQ4G0P3 5121 aa10.3□□□□□ -0.76
HOXC9-202ENST00000504557 PRAF2O60831 178 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 RLN2P04090 185 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 S100A11P31949 105 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
HOXC9-202ENST00000504557 HIST1H1AQ02539 215 aaPredicted RBP10.29□□□□□ -0.76
HOXC9-202ENST00000504557 NHLH2Q02577 135 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 Q6ZRG5 221 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 OR5AC2Q9NZP5 309 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 WDR83OSQ9Y284 106 aa10.29□□□□□ -0.76
HOXC9-202ENST00000504557 TRAV5A0A0B4J249 113 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 IGLL5B9A064 214 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 M0R2Z0 102 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 B2MP61769 119 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms