RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 CCL24O00175 119 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 CD5P06127 495 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 HOXD3P31249 432 aaPredicted RBP7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 MYCNOSP40205 109 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 PPT1P50897 306 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 KHDC3LQ587J8 217 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 TOMM20LQ6UXN7 152 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 REC114Q7Z4M0 266 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 FAM213BQ8TBF2 198 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 MARC2Q969Z3 335 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 GPR82Q96P67 336 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 DAZ1Q9NQZ3 744 aaKnown RBP7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 DOK5Q9P104 306 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 FUT9Q9Y231 359 aa7.08□□□□□ -1.28
ARHGEF28-206ENST00000504003 IGHV3-35A0A0C4DH35 117 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 CXorf1O96002 111 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 TRBV12-3P01733 135 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 RPL7P18124 248 aaKnown RBP7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 C1orf194Q5T5A4 169 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 PQLC2Q6ZP29 291 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 BPIFA4PQ86YQ2 179 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 EIF4E3Q8N5X7 224 aaKnown RBP7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 TMEM190Q8WZ59 177 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 SLC25A39Q9BZJ4 359 aaPredicted RBP7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 RPRMQ9NS64 109 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 CUBNO60494 3623 aa7.07□□□□□ -1.28
ARHGEF28-206ENST00000504003 HELTA6NFD8 242 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 SEC14L6B5MCN3 397 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 IFNA1P01562 189 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 GALR1P47211 349 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 MEOX2P50222 304 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 KLF5Q13887 457 aaPredicted RBP7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 TMEM37Q8WXS4 190 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 CITED1Q99966 193 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 SHANK2-AS3Q9BTD1 123 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 SLC25A22Q9H936 323 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 TMEM167BQ9NRX6 74 aa7.06□□□□□ -1.28
ARHGEF28-206ENST00000504003 JMJD1CQ15652 2540 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 MAP1LC3B2A6NCE7 125 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 ZNF98A6NK75 572 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 A8MWP6 167 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 OVOL1O14753 267 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 OR7C2O60412 319 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 CRYBB3P26998 211 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 TAGLN2P37802 199 aaKnown RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 PSMB3P49720 205 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 CTAG1AP78358 180 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 USF2Q15853 346 aaPredicted RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 FAM74A1Q5RGS3 127 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 RPP25LQ8N5L8 163 aaKnown RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 RCC1LQ96I51 464 aaKnown RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 RAX2Q96IS3 184 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 MAP1LC3BQ9GZQ8 125 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 VSIRQ9H7M9 311 aa7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 SEPSECSQ9HD40 501 aaKnown RBP7.05□□□□□ -1.28
ARHGEF28-206ENST00000504003 IGHV7-4-1A0A0J9YVY3 117 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 H3BRN7 92 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 STAG3L3P0CL85 134 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 SLURP1P55000 103 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 PAFAH1B2P68402 229 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 FHL3Q13643 280 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 GUK1Q16774 197 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 GCSAMLQ5JQS6 135 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 LCN15Q6UWW0 184 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 C18orf65Q6ZTR6 163 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 MBD3L1Q8WWY6 194 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 UHRF2Q96PU4 802 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 MCRIP2Q9BUT9 160 aaKnown RBP7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 NKX6-2Q9C056 277 aaPredicted RBP7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 OR51M1Q9H341 326 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 RFNGQ9Y644 331 aa7.04□□□□□ -1.28
ARHGEF28-206ENST00000504003 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 ZNF785A8K8V0 405 aa7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 ZNF207O43670 478 aaKnown RBP7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 BUB3O43684 328 aa7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 UBE2L3P68036 154 aaKnown RBP7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 TM4SF20Q53R12 229 aa7.03□□□□□ -1.28
ARHGEF28-206ENST00000504003 UNQ9165/PRO28630Q6UXU0 137 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms