RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CD1AP06126 327 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 HOXB5P09067 269 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 RNASE2P10153 161 aaKnown RBP2.55□□□□□ -2
CSTF1-207ENST00000498689 ZNF19P17023 458 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 DCKP27707 260 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 SERPINB10P48595 397 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 C21orf62-AS1Q17RA5 79 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 PCOTHQ58A44 107 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 H2BFWTQ7Z2G1 175 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 SH2D6Q7Z4S9 175 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 SPAG16Q8N0X2 631 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 ARRDC1Q8N5I2 433 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 JAGN1Q8N5M9 183 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 ZBTB34Q8NCN2 500 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 ZNF738Q8NE65 137 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 MNS1Q8NEH6 495 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 OR8A1Q8NGG7 326 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 OR8J1Q8NGP2 316 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 OR4X1Q8NH49 305 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 HSD17B10Q99714 261 aaKnown RBP2.55□□□□□ -2
CSTF1-207ENST00000498689 GTSF1LQ9H1H1 148 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 FGF20Q9NP95 211 aaPredicted RBP2.55□□□□□ -2
CSTF1-207ENST00000498689 PLEKHJ1Q9NW61 149 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 KCNK7Q9Y2U2 307 aa2.55□□□□□ -2
CSTF1-207ENST00000498689 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 NDUFS6O75380 124 aaKnown RBP2.54□□□□□ -2
CSTF1-207ENST00000498689 IGLC1P0CG04 106 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 CT45A10P0DMU9 189 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 NQO2P16083 231 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 OR10A3P58181 314 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 TAS2R31P59538 309 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 BTN1A1Q13410 526 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 SAMD13Q5VXD3 122 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 CDH26Q8IXH8 852 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 OR10G2Q8NGC3 310 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 OR10P1Q8NGE3 313 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 OR10G4Q8NGN3 311 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 OR5AK2Q8NH90 309 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 Q8WTZ3 238 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 TMEM56Q96MV1 263 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 C20orf144Q9BQM9 153 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 GINS4Q9BRT9 223 aa2.54□□□□□ -2
CSTF1-207ENST00000498689 CARHSP1Q9Y2V2 147 aaKnown RBP2.54□□□□□ -2
CSTF1-207ENST00000498689 ZSCAN12O43309 604 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 GSTZ1O43708 216 aaPredicted RBP2.53□□□□□ -2
CSTF1-207ENST00000498689 TOMM40O96008 361 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 NPPAP01160 153 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 PFN1P07737 140 aaKnown RBP2.53□□□□□ -2
CSTF1-207ENST00000498689 OR10J4P0C629 311 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 NFYAP23511 347 aaPredicted RBP2.53□□□□□ -2
CSTF1-207ENST00000498689 HRH1P35367 487 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 RFX2P48378 723 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 TMEM50BP56557 158 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 KRTAP10-10P60014 251 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 PPP3R1P63098 170 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 EFNB1P98172 346 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 ZIK1Q3SY52 487 aaPredicted RBP2.53□□□□□ -2
CSTF1-207ENST00000498689 CCDC190Q86UF4 302 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 ZNF680Q8NEM1 530 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 TYMSOSQ8TAI1 123 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 SEC22AQ96IW7 307 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 C4orf36Q96KX1 117 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 CMSS1Q9BQ75 279 aaKnown RBP2.53□□□□□ -2
CSTF1-207ENST00000498689 PYGO2Q9BRQ0 406 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 RSG1Q9BU20 258 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 PBDC1Q9BVG4 233 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 TMEM222Q9H0R3 208 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 SLC25A32Q9H2D1 315 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 PLEKHA2Q9HB19 425 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 C12orf4Q9NQ89 552 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 PRR34Q9NV39 138 aa2.53□□□□□ -2
CSTF1-207ENST00000498689 SLC16A6O15403 523 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 RBFOX2O43251 390 aaKnown RBP eCLIP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 HPRT1P00492 218 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 TSHBP01222 138 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 HLA-DQB1P01920 261 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 PSG1P11464 419 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 OSMP13725 252 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 OR10J1P30954 320 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 GTF2A1P52655 376 aaPredicted RBP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 YPEL3P61236 119 aaPredicted RBP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 POLR2GP62487 172 aaKnown RBP eCLIP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 SUPT4H1P63272 117 aaKnown RBP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 SRPXP78539 464 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 HS3ST5Q8IZT8 346 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 SLC25A29Q8N8R3 303 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 BPIFB6Q8NFQ5 453 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 ZNF431Q8TF32 576 aaPredicted RBP2.52□□□□□ -2.01
CSTF1-207ENST00000498689 ARHGAP5-AS1Q96IT6 56 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 PGLYRP3Q96LB9 341 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
CSTF1-207ENST00000498689 A0A075B6Q4 140 aa2.51□□□□□ -2.01
CSTF1-207ENST00000498689 IGKV2D-30A0A075B6S6 120 aa2.51□□□□□ -2.01
CSTF1-207ENST00000498689 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.51□□□□□ -2.01
CSTF1-207ENST00000498689 A0A1W2PNN7 141 aa2.51□□□□□ -2.01
CSTF1-207ENST00000498689 TMEM212A6NML5 194 aa2.51□□□□□ -2.01
CSTF1-207ENST00000498689 PRAC2D3DTV9 90 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms