RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 APOC4P55056 127 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 DEFB131AP59861 70 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 RAP2BP61225 183 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 NHLH2Q02577 135 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 BAXQ07812 192 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 OXA1LQ15070 435 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 ATP6V1FQ16864 119 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 PXDC1Q5TGL8 231 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 LEMD1Q68G75 181 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 OR8I2Q8N0Y5 310 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 KIR2DL5AQ8N109 375 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 OR11H7Q8NGC8 314 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 KIR2DL5BQ8NHK3 375 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SHANK2-AS3Q9BTD1 123 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SCRT1Q9BWW7 348 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SLC25A39Q9BZJ4 359 aaPredicted RBP8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SLC25A32Q9H2D1 315 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 SEPSECSQ9HD40 501 aaKnown RBP8.3□□□□□ -1.08
ERCC8-208ENST00000497892 HIGD1AQ9Y241 93 aa8.3□□□□□ -1.08
ERCC8-208ENST00000497892 HYPMO75409 117 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
ERCC8-208ENST00000497892 RAB31Q13636 194 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 FCN2Q15485 313 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 OR5C1Q8NGR4 320 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 WWC2-AS2Q96NR7 200 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 GPR82Q96P67 336 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 UHRF2Q96PU4 802 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 ARL6Q9H0F7 186 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 MED28Q9H204 178 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 SLC25A22Q9H936 323 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 RETNQ9HD89 108 aa8.29□□□□□ -1.08
ERCC8-208ENST00000497892 UBE2CO00762 179 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 SOCS3O14543 225 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 MPDU1O75352 247 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 OR5G3P0C626 314 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 LYL1P12980 280 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 RPL35AP18077 110 aaKnown RBP8.28□□□□□ -1.08
ERCC8-208ENST00000497892 GALR1P47211 349 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 OPCMLQ14982 345 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 PSMG4Q5JS54 123 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 SAMD13Q5VXD3 122 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 PATE2Q6UY27 113 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 Q6ZWC4 215 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 CHAC2Q8WUX2 184 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 ARV1Q9H2C2 271 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 MBD2Q9UBB5 411 aa8.28□□□□□ -1.08
ERCC8-208ENST00000497892 COX7A2P2O60397 106 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 FGF7P21781 194 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
ERCC8-208ENST00000497892 PSMB3P49720 205 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 MEOX2P50222 304 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 TRPT1Q86TN4 253 aaKnown RBP8.27□□□□□ -1.09
ERCC8-208ENST00000497892 ASB13Q8WXK3 278 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 C17orf77Q96MU5 243 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 RNF24Q9Y225 148 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 TP53TG1Q9Y2A0 90 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 HSPB11Q9Y547 144 aa8.27□□□□□ -1.09
ERCC8-208ENST00000497892 AGRNO00468 2067 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 ISLRO14498 428 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
ERCC8-208ENST00000497892 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
ERCC8-208ENST00000497892 RPL12P30050 165 aaKnown RBP8.26□□□□□ -1.09
ERCC8-208ENST00000497892 CLINT1Q14677 625 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 DEFB135Q30KP9 77 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 ACTL10Q5JWF8 245 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 MIC13Q5XKP0 118 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 Q6ZRG5 221 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 LINC00305Q7Z4B0 112 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 THAP6Q8TBB0 222 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 TMEM37Q8WXS4 190 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 NPCDR1Q9BY65 106 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 KRTAP4-7Q9BYR0 210 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 SLC39A9Q9NUM3 307 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 PXMP4Q9Y6I8 212 aa8.26□□□□□ -1.09
ERCC8-208ENST00000497892 KNCNA6PVL3 124 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 MRPS12O15235 138 aaKnown RBP8.25□□□□□ -1.09
ERCC8-208ENST00000497892 ID1P41134 155 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 B2MP61769 119 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 C10orf113Q5VZT2 155 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 STHQ8IWL8 128 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 PFDN5Q99471 154 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 ATP5SQ99766 215 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 WDR61Q9GZS3 305 aaKnown RBP8.25□□□□□ -1.09
ERCC8-208ENST00000497892 CSTL1Q9H114 145 aa8.25□□□□□ -1.09
ERCC8-208ENST00000497892 A0A087X0K7 114 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 CA1P00915 261 aaPredicted RBP8.24□□□□□ -1.09
ERCC8-208ENST00000497892 SPP1P10451 314 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 ATF4P18848 351 aaPredicted RBP8.24□□□□□ -1.09
ERCC8-208ENST00000497892 FGL1Q08830 312 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 MORN5Q5VZ52 161 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 RNF183Q96D59 192 aa8.24□□□□□ -1.09
ERCC8-208ENST00000497892 C16orf92Q96LL3 132 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms