RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 SGMS2Q8NHU3 365 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF418Q8TF45 676 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-208ENST00000497026 PP6455Q8WZ26 134 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 FAM103A1Q9BTL3 118 aaKnown RBP3.92□□□□□ -1.78
CSMD3-208ENST00000497026 TM2D1Q9BX74 207 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 PKIBQ9C010 78 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 NRN1Q9NPD7 142 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 RPRMQ9NS64 109 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 KCNIP1Q9NZI2 227 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 SLC25A10Q9UBX3 287 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-208ENST00000497026 POLDIP2Q9Y2S7 368 aa3.92□□□□□ -1.78
CSMD3-208ENST00000497026 C3orf85A0A1B0GTC6 90 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 GAGE10A6NGK3 116 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SNURFLB1AK76 121 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SPRY1O43609 319 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-208ENST00000497026 HLA-DQA1P01909 254 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 LIPFP07098 398 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 IGLC1P0CG04 106 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SLC25A6P12236 298 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 BCL3P20749 454 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 OR3A4PP47883 348 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 LGALS7P47929 136 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 FUT6P51993 359 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 FXYD4P59646 89 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 PLP1P60201 277 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 CKS1BP61024 79 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 UBE2G1P62253 170 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 HTD2P86397 168 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 PSG9Q00887 426 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 HIST1H1AQ02539 215 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-208ENST00000497026 KLRD1Q13241 179 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 RAB31Q13636 194 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 RPEL1Q2QD12 228 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 DEFB112Q30KQ8 113 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 HCP5Q6MZN7 132 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 C18orf65Q6ZTR6 163 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 TCF23Q7RTU1 214 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SAXO1Q8IYX7 474 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 Q8N976 141 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 OR10G8Q8NGN5 311 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 OR1N2Q8NGR9 330 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 H1FXQ92522 213 aaKnown RBP3.91□□□□□ -1.78
CSMD3-208ENST00000497026 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
CSMD3-208ENST00000497026 BORCS8Q96FH0 119 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 MRAP2Q96G30 205 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SFRP2Q96HF1 295 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 DUX5Q96PT3 197 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SPACA5Q96QH8 159 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 GNB1LQ9BYB4 327 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
CSMD3-208ENST00000497026 KCNIP2Q9NS61 270 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 WASHC3Q9Y3C0 194 aa3.91□□□□□ -1.78
CSMD3-208ENST00000497026 ATRQ13535 2644 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 IGHV1-69DA0A0B4J2H0 117 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 A0A1B0GUS0 222 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 ODAMA1E959 279 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 OR2T8A6NH00 312 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 FOXI3A8MTJ6 420 aaPredicted RBP3.9□□□□□ -1.78
CSMD3-208ENST00000497026 C11orf94C9JXX5 98 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 K7EP34 96 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 SLC33A1O00400 549 aaPredicted RBP3.9□□□□□ -1.78
CSMD3-208ENST00000497026 FCN1O00602 326 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF207O43670 478 aaKnown RBP3.9□□□□□ -1.78
CSMD3-208ENST00000497026 ANGPTL7O43827 346 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 CA2P00918 260 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 IGHV1-69P01742 117 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 C3orf79P0CE67 100 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 CCL3L1P16619 93 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 VDAC1P21796 283 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 PRTN3P24158 256 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 PRDX2P32119 198 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 RAB9AP51151 201 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 DLX6P56179 175 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF726P1Q15940 193 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 SP6Q3SY56 376 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 BVES-AS1Q5T3Y7 98 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 SELENOHQ8IZQ5 122 aaKnown RBP3.9□□□□□ -1.78
CSMD3-208ENST00000497026 KIR3DL3Q8N743 410 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 C5orf17Q8NAS9 161 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 OR10V1Q8NGI7 309 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 PLPPR1Q8TBJ4 325 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 UHRF2Q96PU4 802 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM191AQ9H0A3 160 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM222Q9H0R3 208 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 PLEKHJ1Q9NW61 149 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 ONECUT1Q9UBC0 465 aa3.9□□□□□ -1.78
CSMD3-208ENST00000497026 UBE2L5PA0A1B0GUS4 154 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM89A2RUT3 159 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 PSMB11A5LHX3 300 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 H0Y980 276 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 K7EQM0 130 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 M0R1W7 72 aa3.89□□□□□ -1.79
CSMD3-208ENST00000497026 NUPR1O60356 82 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms