RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TCTEX1D1Q8N7M0 179 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 FER1L6-AS1Q8NA97 138 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 OR4B1Q8NGF8 309 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 OR51A2Q8NGJ7 313 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 OR13C6PQ8NH95 151 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 SMIM4Q8WVI0 70 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 GALMQ96C23 342 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 LINC00477Q96M19 166 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 IP6K3Q96PC2 410 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 SLC25A21Q9BQT8 299 aaPredicted RBP3□□□□□ -1.93
SF3B1-212ENST00000496458 SLC35B3Q9H1N7 401 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 PLEKHF2Q9H8W4 249 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 LRTM1Q9HBL6 345 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 ABRACLQ9P1F3 81 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 TRAPPC2LQ9UL33 140 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF780BQ9Y6R6 833 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 NUP205Q92621 2012 aa3□□□□□ -1.93
SF3B1-212ENST00000496458 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 OBSL1O75147 1896 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 KIF26AQ9ULI4 1882 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TRAV38-1A0A0B4J264 116 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 A0A0J9YY10 115 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 A0A1B0GV50 99 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 A0A1B0GX78 115 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM189A5PLL7 270 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 ARRDC5A6NEK1 342 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 LOC730098B7Z3J9 87 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 UMAD1C9J7I0 102 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 NDUFC2-KCTD14E9PQ53 114 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 H7BYZ3 331 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 J3QR89 54 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 YPEL1O60688 119 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 OR12D1P0DN82 309 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 CTSEP14091 401 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 GABRA3P34903 492 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 CCR2P41597 374 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 UBE2AP49459 152 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 POLR2JP52435 117 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 MP68P56378 58 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 S100A10P60903 97 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 HSPE1P61604 102 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 RPS25P62851 125 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM267Q0VDI3 215 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 DHRS2Q13268 280 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TMEM128Q5BJH2 165 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 Q6ZR03 302 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 LINC00596Q86U02 117 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 ST6GALNAC3Q8NDV1 305 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TSTD1Q8NFU3 115 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 OR2K2Q8NGT1 345 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 OR51H1Q8NH63 302 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 C2orf15Q8WU43 125 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 PSMF1Q92530 271 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 FGF13Q92913 245 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 GPR82Q96P67 336 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 YPEL2Q96QA6 119 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TSPAN32Q96QS1 320 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 VAMP8Q9BV40 100 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 BANF2Q9H503 90 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 TAF9BQ9HBM6 251 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 CISHQ9NSE2 258 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 MRPL16Q9NX20 251 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 PKIGQ9Y2B9 76 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 MAP1BP46821 2468 aaKnown RBP2.99□□□□□ -1.93
SF3B1-212ENST00000496458 MYO16Q9Y6X6 1858 aa2.99□□□□□ -1.93
SF3B1-212ENST00000496458 DMDP11532 3685 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ANKRD12Q6UB98 2062 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TLCD2A6NGC4 264 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 C9JQL5 133 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ISLRO14498 428 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CDS2O95674 445 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 SERPINA7P05543 415 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CTSDP07339 412 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 PFN1P07737 140 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CXCL1P09341 107 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 IGLC1P0CG04 106 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 HMGA1P17096 107 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 RPS4Y1P22090 263 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ATP6V0CP27449 155 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CD34P28906 385 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 GNG4P50150 75 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TAS2R30P59541 319 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 PPP1CAP62136 330 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 HSD52Q0P140 79 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ENDOGQ14249 297 aaKnown RBP2.98□□□□□ -1.93
SF3B1-212ENST00000496458 MMDQ15546 238 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 CCSMST1Q4G0I0 132 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 FAM78AQ5JUQ0 283 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 TOMM20LQ6UXN7 152 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 GTF2H5Q6ZYL4 71 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 OOSP2Q86WS3 158 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 OR4D11Q8NGI4 311 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 OR2T27Q8NH04 317 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 OR1L1Q8NH94 360 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ZNRF2Q8NHG8 242 aa2.98□□□□□ -1.93
SF3B1-212ENST00000496458 ZNF418Q8TF45 676 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms