RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 NEU1Q99519 415 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 RSG1Q9BU20 258 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 NPVFQ9HCQ7 196 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 DOK5Q9P104 306 aa11.36□□□□□ -0.59
HDAC4-213ENST00000496347 ELOA3CA0A087WX78 387 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-213ENST00000496347 A0A0J9YX75 114 aa11.35□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-213ENST00000496347 CCSO14618 274 aa11.35□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF705DP0CH99 300 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-213ENST00000496347 ZNF705BP0CI00 300 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-213ENST00000496347 LGALS9CQ6DKI2 356 aa11.35□□□□□ -0.59
HDAC4-213ENST00000496347 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
HDAC4-213ENST00000496347 FAM240BA0A1B0GVZ2 78 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 TMEM189A5PLL7 270 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 A8MTW9 85 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 L7N2F9 121 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 H2AFB2P0C5Z0 115 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 HLA-DMBP28068 263 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 DEFB1P60022 68 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 VAMP2P63027 116 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 PSG9Q00887 426 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 SLC38A11Q08AI6 406 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 ASAH1Q13510 395 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
HDAC4-213ENST00000496347 VPS13DQ5THJ4 4388 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 A0A087X0K7 114 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 C5orf51A6NDU8 294 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 DEDDO75618 318 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 OR5G3P0C626 314 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 FAM78BQ5VT40 261 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 Q6ZTC4 211 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
HDAC4-213ENST00000496347 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
HDAC4-213ENST00000496347 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 F6UB75 175 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 PVALBP20472 110 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-213ENST00000496347 CAV2P51636 162 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 ARL6Q9H0F7 186 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 LSM5Q9Y4Y9 91 aaKnown RBP11.32□□□□□ -0.6
HDAC4-213ENST00000496347 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
HDAC4-213ENST00000496347 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 GOSR2O14653 212 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 AGPAT2O15120 278 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
HDAC4-213ENST00000496347 AMBPP02760 352 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 CXCL2P19875 107 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 ARL16Q0P5N6 197 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
HDAC4-213ENST00000496347 UPK1BO75841 260 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 BCAP31P51572 246 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 CNN1P51911 297 aaKnown RBP11.3□□□□□ -0.6
HDAC4-213ENST00000496347 FXYD7P58549 80 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 S100A10P60903 97 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 RAB31Q13636 194 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 STX12Q86Y82 276 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 ENKURQ8TC29 256 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 MGST2Q99735 147 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-213ENST00000496347 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
HDAC4-213ENST00000496347 IGLL5B9A064 214 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 HBG1P69891 147 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 HBG2P69892 147 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 FGL1Q08830 312 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 VWC2Q2TAL6 325 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 LCN15Q6UWW0 184 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 ZNF738Q8NE65 137 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 RNF126Q9BV68 326 aa11.29□□□□□ -0.6
HDAC4-213ENST00000496347 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 CST7O76096 145 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 INSP01308 110 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 HBE1P02100 147 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 SPART-AS1P0CW21 52 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 CXCL3P19876 107 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 CAMLGP49069 296 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 SULT1A1P50225 295 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 IL15RAQ13261 267 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 PATE2Q6UY27 113 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms