RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TP53RKQ96S44 253 aa1.61□□□□□ -2.15
SSR3-208ENST00000496050 HOPXQ9BPY8 73 aaPredicted RBP1.61□□□□□ -2.15
SSR3-208ENST00000496050 POPDC3Q9HBV1 291 aa1.61□□□□□ -2.15
SSR3-208ENST00000496050 BIN3Q9NQY0 253 aa1.61□□□□□ -2.15
SSR3-208ENST00000496050 GID8Q9NWU2 228 aa1.61□□□□□ -2.15
SSR3-208ENST00000496050 CD109Q6YHK3 1445 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 EXPH5Q8NEV8 1989 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 PGRMC1O00264 195 aaKnown RBP1.6□□□□□ -2.15
SSR3-208ENST00000496050 MFSD11O43934 449 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
SSR3-208ENST00000496050 ROMO1P60602 79 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 GDF5OSQ5U4N7 250 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 PATE1Q8WXA2 126 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 ZFP30Q9Y2G7 519 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 C22orf24Q9Y442 160 aa1.6□□□□□ -2.15
SSR3-208ENST00000496050 CHCHD2Q9Y6H1 151 aaPredicted RBP1.6□□□□□ -2.15
SSR3-208ENST00000496050 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
SSR3-208ENST00000496050 SYNMO15061 1565 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 EML6Q6ZMW3 1958 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 YTHDC2Q9H6S0 1430 aaKnown RBP1.59□□□□□ -2.15
SSR3-208ENST00000496050 TLCD2A6NGC4 264 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 FABP1P07148 127 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 OR10J4P0C629 311 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 G0S2P27469 103 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 SERPINB1P30740 379 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 DSCR4P56555 118 aaPredicted RBP1.59□□□□□ -2.15
SSR3-208ENST00000496050 GRINAQ7Z429 371 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 OR5D16Q8NGK9 328 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 ZHX1-C8orf76Q96EF9 292 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 ZNF714Q96N38 554 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 CENPHQ9H3R5 247 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 V9GYQ6 96 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 CEP192Q8TEP8 1941 aa1.59□□□□□ -2.15
SSR3-208ENST00000496050 NUP98P52948 1817 aa1.59□□□□□ -2.16
SSR3-208ENST00000496050 TECTAO75443 2155 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 IFNA4P05014 189 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 INSL3P51460 131 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 TRIQKQ629K1 86 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 PATE2Q6UY27 113 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 CROCCP2Q86T23 111 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 AKAP14Q86UN6 197 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 STX19Q8N4C7 294 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 NEK7Q8TDX7 302 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 BORCS5Q969J3 196 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 MUCL1Q96DR8 90 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 GPX7Q96SL4 187 aaPredicted RBP1.58□□□□□ -2.16
SSR3-208ENST00000496050 MAP1LC3BQ9GZQ8 125 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 BOLA2Q9H3K6 86 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 UFC1Q9Y3C8 167 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 TRPM1Q7Z4N2 1603 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 KMT2BQ9UMN6 2715 aaPredicted RBP1.58□□□□□ -2.16
SSR3-208ENST00000496050 MYH10P35580 1976 aa1.58□□□□□ -2.16
SSR3-208ENST00000496050 NUP210LQ5VU65 1888 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 TRAV10A0A0B4J240 114 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 CCL16O15467 120 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 C3orf33Q6P1S2 294 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 NUP35Q8NFH5 326 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 POP5Q969H6 163 aaKnown RBP1.57□□□□□ -2.16
SSR3-208ENST00000496050 RTL8AQ9BWD3 113 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 ORMDL1Q9P0S3 153 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 SMPXQ9UHP9 88 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 MYH2Q9UKX2 1941 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 SCN8AQ9UQD0 1980 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 PIK3C2AO00443 1686 aa1.57□□□□□ -2.16
SSR3-208ENST00000496050 DOCK4Q8N1I0 1966 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 TRBV6-4A0A1B0GX49 114 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 E7EUB6 86 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 H0YJX3 145 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 M0R233 179 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 ERC2-IT1O76042 136 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 CSN2P05814 226 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 CD2P06729 351 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 CXCL1P09341 107 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 TMBIM6P55061 237 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 ARPP19P56211 112 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 CDK6Q00534 326 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 ZNF833PQ6ZTB9 187 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 OR4K15Q8NH41 348 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 ZNF431Q8TF32 576 aaPredicted RBP1.56□□□□□ -2.16
SSR3-208ENST00000496050 PLEKHB2Q96CS7 222 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 MRPL40Q9NQ50 206 aaKnown RBP1.56□□□□□ -2.16
SSR3-208ENST00000496050 TAS2R7Q9NYW3 318 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 OR52A1Q9UKL2 312 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 DLG5Q8TDM6 1919 aa1.56□□□□□ -2.16
SSR3-208ENST00000496050 ZCCHC6Q5VYS8 1495 aaKnown RBP1.56□□□□□ -2.16
SSR3-208ENST00000496050 PPP5D1E7EU14 171 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 HIST1H2BKO60814 126 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 HIST1H2BJP06899 126 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 RAB5CP51148 216 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 KLRD1Q13241 179 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 ALX1Q15699 326 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 TAC4Q86UU9 113 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.55□□□□□ -2.16
SSR3-208ENST00000496050 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 ANKRD30AQ9BXX3 1397 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 NISCHQ9Y2I1 1504 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 ADGBQ8N7X0 1667 aa1.55□□□□□ -2.16
SSR3-208ENST00000496050 MYH3P11055 1940 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms